(v1.3.0.9011) suggests pkg update

2020-08-29 12:04:23 +02:00 · 2020-08-29 12:04:23 +02:00 · 50b953b141
parent 74a172ef55
commit 50b953b141
35 changed files with 22 additions and 19 deletions
--- a/9
+++ b/9
@ -1,6 +1,6 @@
 Package: AMR
-Version: 1.3.0.9010
-Date: 2020-08-28
+Version: 1.3.0.9011
+Date: 2020-08-29
 Title: Antimicrobial Resistance Analysis
 Authors@R: c(
    person(role = c("aut", "cre"), 
@ -42,14 +42,17 @@ Depends:
    R (>= 3.0.0)
 Suggests:
    cleaner,
+    curl,
    dplyr,
    ggplot2,
    knitr,
    microbenchmark,
+    readxl,
    rmarkdown,
+    rvest,
    testthat,
    tidyr,
-    utils
+    xml2
 VignetteBuilder: knitr,rmarkdown
 URL: https://msberends.github.io/AMR, https://github.com/msberends/AMR
 BugReports: https://github.com/msberends/AMR/issues
--- a/NEWS.md
+++ b/NEWS.md
@ -1,5 +1,5 @@
-# AMR 1.3.0.9010
-## <small>Last updated: 28 August 2020</small>
+# AMR 1.3.0.9011
+## <small>Last updated: 29 August 2020</small>

 ### New
 * A new vignette and website page with info about all our public and freely available data sets, that can be downloaded as flat files or in formats for use in R, SPSS, SAS, Stata and Excel: https://msberends.github.io/AMR/articles/datasets.html
--- a/data-raw/antibiotics.dta
+++ b/data-raw/antibiotics.dta
--- a/data-raw/antibiotics.sas
+++ b/data-raw/antibiotics.sas
--- a/data-raw/antibiotics.sav
+++ b/data-raw/antibiotics.sav
--- a/data-raw/antibiotics.xlsx
+++ b/data-raw/antibiotics.xlsx
--- a/data-raw/antivirals.dta
+++ b/data-raw/antivirals.dta
--- a/data-raw/antivirals.sas
+++ b/data-raw/antivirals.sas
--- a/data-raw/antivirals.sav
+++ b/data-raw/antivirals.sav
--- a/data-raw/antivirals.xlsx
+++ b/data-raw/antivirals.xlsx
--- a/data-raw/intrinsic_resistant.dta
+++ b/data-raw/intrinsic_resistant.dta
--- a/data-raw/intrinsic_resistant.sas
+++ b/data-raw/intrinsic_resistant.sas
--- a/data-raw/intrinsic_resistant.sav
+++ b/data-raw/intrinsic_resistant.sav
--- a/data-raw/intrinsic_resistant.xlsx
+++ b/data-raw/intrinsic_resistant.xlsx
--- a/data-raw/microorganisms.dta
+++ b/data-raw/microorganisms.dta
--- a/data-raw/microorganisms.old.dta
+++ b/data-raw/microorganisms.old.dta
--- a/data-raw/microorganisms.old.sas
+++ b/data-raw/microorganisms.old.sas
--- a/data-raw/microorganisms.old.sav
+++ b/data-raw/microorganisms.old.sav
--- a/data-raw/microorganisms.old.xlsx
+++ b/data-raw/microorganisms.old.xlsx
--- a/data-raw/microorganisms.sas
+++ b/data-raw/microorganisms.sas
--- a/data-raw/microorganisms.sav
+++ b/data-raw/microorganisms.sav
--- a/data-raw/microorganisms.xlsx
+++ b/data-raw/microorganisms.xlsx
--- a/data-raw/rsi_translation.dta
+++ b/data-raw/rsi_translation.dta
--- a/data-raw/rsi_translation.sas
+++ b/data-raw/rsi_translation.sas
--- a/data-raw/rsi_translation.sav
+++ b/data-raw/rsi_translation.sav
--- a/data-raw/rsi_translation.xlsx
+++ b/data-raw/rsi_translation.xlsx
--- a/docs/404.html
+++ b/docs/404.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="https://msberends.github.io/AMR/index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/LICENSE-text.html
+++ b/docs/LICENSE-text.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/articles/index.html
+++ b/docs/articles/index.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="../index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/authors.html
+++ b/docs/authors.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/index.html
+++ b/docs/index.html
@ -43,7 +43,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/news/index.html
+++ b/docs/news/index.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="../index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

@ -236,13 +236,13 @@
      <small>Source: <a href='https://github.com/msberends/AMR/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
    </div>

-    <div id="amr-1309010" class="section level1">
-<h1 class="page-header" data-toc-text="1.3.0.9010">
-<a href="#amr-1309010" class="anchor"></a>AMR 1.3.0.9010<small> Unreleased </small>
+    <div id="amr-1309011" class="section level1">
+<h1 class="page-header" data-toc-text="1.3.0.9011">
+<a href="#amr-1309011" class="anchor"></a>AMR 1.3.0.9011<small> Unreleased </small>
 </h1>
-<div id="last-updated-28-august-2020" class="section level2">
+<div id="last-updated-29-august-2020" class="section level2">
 <h2 class="hasAnchor">
-<a href="#last-updated-28-august-2020" class="anchor"></a><small>Last updated: 28 August 2020</small>
+<a href="#last-updated-29-august-2020" class="anchor"></a><small>Last updated: 29 August 2020</small>
 </h2>
 <div id="new" class="section level3">
 <h3 class="hasAnchor">
--- a/docs/pkgdown.yml
+++ b/docs/pkgdown.yml
@ -2,7 +2,7 @@ pandoc: 2.7.3
 pkgdown: 1.5.1.9000
 pkgdown_sha: eae56f08694abebf93cdfc0dd8e9ede06d8c815f
 articles: []
-last_built: 2020-08-28T19:54Z
+last_built: 2020-08-29T10:02Z
 urls:
  reference: https://msberends.github.io/AMR/reference
  article: https://msberends.github.io/AMR/articles
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="../index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>

--- a/docs/survey.html
+++ b/docs/survey.html
@ -81,7 +81,7 @@
      </button>
      <span class="navbar-brand">
        <a class="navbar-link" href="index.html">AMR (for R)</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9010</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.3.0.9011</span>
      </span>
    </div>