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website update
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23
_pkgdown.yml
23
_pkgdown.yml
@ -32,7 +32,7 @@ template:
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assets: "pkgdown/logos" # use logos in this folder
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bslib:
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code_font: {google: "Fira Code"}
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body-text-align: "justify"
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# body-text-align: "justify"
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line-height-base: 1.75
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# the green "success" colour of this bootstrap theme should be the same as the green in our logo
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success: "#128f76"
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@ -47,9 +47,9 @@ template:
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news:
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one_page: true
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cran_dates: true
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footer:
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structure:
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structure:
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left: [devtext]
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right: [logo]
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components:
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@ -99,9 +99,9 @@ navbar:
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- text: "Get properties of an antibiotic"
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icon: "fa-capsules"
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href: "reference/ab_property.html" # reference instead of an article
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- text: "Other: benchmarks"
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icon: "fa-shipping-fast"
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href: "articles/benchmarks.html"
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# - text: "Other: benchmarks"
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# icon: "fa-shipping-fast"
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# href: "articles/benchmarks.html"
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- text: "Manual"
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icon: "fa-book-open"
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href: "reference/index.html"
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@ -128,7 +128,7 @@ reference:
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- "`as.mo`"
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- "`mo_property`"
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- "`mo_source`"
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- title: "Preparing data: antibiotics"
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desc: >
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Use these functions to get valid properties of antibiotics from any input or to clean your input.
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@ -138,7 +138,7 @@ reference:
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- "`ab_property`"
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- "`ab_from_text`"
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- "`atc_online_property`"
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- title: "Preparing data: antimicrobial resistance"
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desc: >
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With `as.mic()` and `as.disk()` you can transform your raw input to valid MIC or disk diffusion values.
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@ -150,7 +150,7 @@ reference:
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- "`as.disk`"
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- "`eucast_rules`"
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- "`custom_eucast_rules`"
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- title: "Analysing data: antimicrobial resistance"
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desc: >
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Use these function for the analysis part. You can use `susceptibility()` or `resistance()` on any antibiotic column.
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@ -190,7 +190,7 @@ reference:
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- "`example_isolates_unclean`"
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- "`rsi_translation`"
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- "`WHONET`"
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- title: "Other: miscellaneous functions"
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desc: >
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These functions are mostly for internal use, but some of
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@ -208,7 +208,7 @@ reference:
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- "`mo_matching_score`"
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- "`pca`"
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- "`random`"
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- title: "Other: statistical tests"
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desc: >
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Some statistical tests or methods are not part of base R and were added to this package for convenience.
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@ -224,4 +224,3 @@ reference:
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in a future version.
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contents:
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- "`AMR-deprecated`"
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