P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-09 04:02:19 +02:00
Code Releases Activity

Restored Pichia and Meyerozyma

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2022-09-23 13:12:46 +02:00
parent 92e5cba3dd
commit 6e3c553d0c
25 changed files with 83 additions and 83 deletions
Download Patch File Download Diff File Expand all files Collapse all files

4
data-raw/_pre_commit_hook.R
View File

@ -173,11 +173,11 @@ MO_PREVALENT_GENERA <- c(
"Empedobacter", "Entamoeba", "Enterobius", "Exophiala", "Exserohilum", "Fasciola", "Flavobacterium", "Fonsecaea",
"Fusarium", "Fusobacterium", "Giardia", "Haloarcula", "Halobacterium", "Halococcus", "Hendersonula",
"Heterophyes", "Histomonas", "Histoplasma", "Hymenolepis", "Hypomyces", "Hysterothylacium", "Leishmania", "Lelliottia",
"Leptosphaeria", "Leptotrichia", "Lucilia", "Lumbricus", "Malassezia", "Malbranchea", "Metagonimus",
"Leptosphaeria", "Leptotrichia", "Lucilia", "Lumbricus", "Malassezia", "Malbranchea", "Metagonimus", "Meyerozyma",
"Microsporidium", "Microsporum", "Mortierella", "Mucor", "Mycocentrospora", "Mycoplasma", "Myroides", "Necator",
"Nectria", "Ochroconis", "Odoribacter", "Oesophagostomum", "Oidiodendron", "Opisthorchis",
"Ornithobacterium", "Parabacteroides", "Pediculus", "Pedobacter", "Phlebotomus", "Phocaeicola",
"Phocanema", "Phoma", "Piedraia", "Pithomyces", "Pityrosporum", "Pneumocystis", "Porphyromonas", "Prevotella",
"Phocanema", "Phoma", "Pichia", "Piedraia", "Pithomyces", "Pityrosporum", "Pneumocystis", "Porphyromonas", "Prevotella",
"Pseudallescheria", "Pseudoterranova", "Pulex", "Rhizomucor", "Rhizopus", "Rhodotorula", "Riemerella",
"Saccharomyces", "Sarcoptes", "Scolecobasidium", "Scopulariopsis", "Scytalidium", "Sphingobacterium",
"Spirometra", "Spiroplasma", "Sporobolomyces", "Stachybotrys", "Streptobacillus", "Strongyloides",

BIN
data-raw/microorganisms.dta
View File

Binary file not shown.

BIN
data-raw/microorganisms.feather
View File

Binary file not shown.

2
data-raw/microorganisms.md5
View File

@ -1 +1 @@
8a398d697f3a66e4049c0b5d9d5e8ade
004b36b27ef78bc03cd12cca3794126e

BIN
data-raw/microorganisms.parquet
View File

Binary file not shown.

BIN
data-raw/microorganisms.rds
View File

Binary file not shown.

BIN
data-raw/microorganisms.sas
View File

Binary file not shown.

BIN
data-raw/microorganisms.sav
View File

Binary file not shown.

BIN
data-raw/microorganisms.xlsx
View File

Binary file not shown.

2
data-raw/rsi.md5
View File

@ -1 +1 @@
9434cfd3f9c6bab485a7c00e59821b61
42c3626166f4521af288bb3d70a17271

BIN
data-raw/rsi_translation.dta
View File

Binary file not shown.

BIN
data-raw/rsi_translation.feather
View File

Binary file not shown.

BIN
data-raw/rsi_translation.parquet
View File

Binary file not shown.

BIN
data-raw/rsi_translation.rds
View File

Binary file not shown.

BIN
data-raw/rsi_translation.sas
View File

Binary file not shown.

BIN
data-raw/rsi_translation.sav
View File

Binary file not shown.

136
data-raw/rsi_translation.txt
View File

@ -8,7 +8,7 @@
"EUCAST 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2022" "MIC" "F_CRYPT_NFRM" "Cryptococcus neoformans" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2022" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2022" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2022" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2022" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -82,7 +82,7 @@
"EUCAST 2022" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 4 4 FALSE
"EUCAST 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2022" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2022" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2022" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2022" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 18 FALSE
@ -1068,7 +1068,7 @@
"EUCAST 2021" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2021" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2021" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -1140,7 +1140,7 @@
"EUCAST 2021" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2021" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2021" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 18 FALSE
@ -1957,7 +1957,7 @@
"EUCAST 2020" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2020" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2020" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -2027,7 +2027,7 @@
"EUCAST 2020" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2020" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2020" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 18 FALSE
@ -2765,7 +2765,7 @@
"EUCAST 2019" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2019" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2019" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2019" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2019" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -2824,7 +2824,7 @@
"EUCAST 2019" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2019" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2019" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2019" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2019" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 18 18 FALSE
@ -3506,7 +3506,7 @@
"EUCAST 2018" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2018" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2018" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2018" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2018" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2018" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2018" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2018" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -3562,7 +3562,7 @@
"EUCAST 2018" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2018" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2018" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2018" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2018" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2018" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2018" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2018" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 16 FALSE
@ -4231,7 +4231,7 @@
"EUCAST 2017" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2017" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2017" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2017" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2017" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2017" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2017" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2017" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -4287,7 +4287,7 @@
"EUCAST 2017" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2017" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2017" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2017" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2017" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2017" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 26 21 FALSE
"EUCAST 2017" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2017" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 16 FALSE
@ -4946,7 +4946,7 @@
"EUCAST 2016" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2016" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2016" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2016" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2016" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2016" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2016" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2016" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -4999,7 +4999,7 @@
"EUCAST 2016" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2016" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2016" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2016" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2016" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2016" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 24 21 FALSE
"EUCAST 2016" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2016" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 16 FALSE
@ -5597,7 +5597,7 @@
"EUCAST 2015" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2015" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2015" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2015" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2015" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2015" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2015" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2015" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -5650,7 +5650,7 @@
"EUCAST 2015" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2015" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2015" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2015" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2015" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2015" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 24 21 FALSE
"EUCAST 2015" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2015" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 16 FALSE
@ -6224,7 +6224,7 @@
"EUCAST 2014" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2014" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2014" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2014" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2014" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2014" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 19 19 FALSE
"EUCAST 2014" "DISK" "UTI" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20-10" 16 16 TRUE
"EUCAST 2014" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
@ -6277,7 +6277,7 @@
"EUCAST 2014" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2014" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Candida" 0.002 4 FALSE
"EUCAST 2014" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2014" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2014" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2014" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30" 24 21 FALSE
"EUCAST 2014" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2014" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseudo" "30" 50 16 FALSE
@ -6846,7 +6846,7 @@
"EUCAST 2013" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2013" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2013" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2013" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2013" "MIC" "F_PICHI" "Pichia" 3 "AMB" "Amphotericin B" "Candida" 1 1 FALSE
"EUCAST 2013" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" "20/10ug" 17 17 FALSE
"EUCAST 2013" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Enterobacteriaceae" 8 8 FALSE
"EUCAST 2013" "MIC" "B_ENTRC" "Enterococcus" 3 "AMC" "Amoxicillin/clavulanic acid" "Enterococcus" 4 8 FALSE
@ -6896,7 +6896,7 @@
"EUCAST 2013" "MIC" "F_CANDD_ALBC" "Candida albicans" 2 "ANI" "Anidulafungin" "Candida" 0.032 0.032 FALSE
"EUCAST 2013" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2013" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2013" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2013" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Candida" 0.064 0.064 FALSE
"EUCAST 2013" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" "30ug" 24 21 FALSE
"EUCAST 2013" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Enterobacteriaceae" 1 4 FALSE
"EUCAST 2013" "DISK" "B_PSDMN" "Pseudomonas" 3 "ATM" "Aztreonam" "Pseud" "30ug" 50 16 FALSE
@ -8481,8 +8481,8 @@
"CLSI 2022" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" "30ug" 21 17 FALSE
"CLSI 2022" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" 4 16 FALSE
"CLSI 2022" "DISK" "B_AERMN" "Aeromonas" 3 "ATM" "Aztreonam" "M45 Table 2" "30ug" 21 17 FALSE
@ -8532,10 +8532,10 @@
"CLSI 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" "10ug" 18 14 FALSE
"CLSI 2022" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" 4 16 FALSE
"CLSI 2022" "DISK" "B_HMPHL_INFL" "Haemophilus influenzae" 2 "CAT" "Cefetamet" "Table 2E" "10ug" 18 14 FALSE
@ -9292,10 +9292,10 @@
"CLSI 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2022" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2022" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" "30ug" 16 12 FALSE
"CLSI 2022" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" 4 16 FALSE
"CLSI 2022" "DISK" "B_ACNTB" "Acinetobacter" 3 "MNO" "Minocycline" "Table 2B-2" "30ug" 16 12 FALSE
@ -9679,8 +9679,8 @@
"CLSI 2022" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2022" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 17 14 FALSE
"CLSI 2022" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2022" "DISK" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2022" "MIC" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Table 2A" "20ug/10ug" 18 13 FALSE
"CLSI 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Table 2A" 8 32 FALSE
"CLSI 2021" "DISK" "B_AERMN" "Aeromonas" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 2" "20ug" 18 13 FALSE
@ -9745,8 +9745,8 @@
"CLSI 2021" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" "30ug" 21 17 FALSE
"CLSI 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" 4 16 FALSE
"CLSI 2021" "DISK" "B_AERMN" "Aeromonas" 3 "ATM" "Aztreonam" "M45 Table 2" "30ug" 21 17 FALSE
@ -9792,10 +9792,10 @@
"CLSI 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" "10ug" 18 14 FALSE
"CLSI 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" 4 16 FALSE
"CLSI 2021" "DISK" "B_HMPHL" "Haemophilus" 3 "CAT" "Cefetamet" "Table 2E" "10ug" 18 14 FALSE
@ -10488,10 +10488,10 @@
"CLSI 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2021" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2021" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" "30ug" 16 12 FALSE
"CLSI 2021" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" 4 16 FALSE
"CLSI 2021" "DISK" "B_ACNTB" "Acinetobacter" 3 "MNO" "Minocycline" "Table 2B-2" "30ug" 16 12 FALSE
@ -10861,8 +10861,8 @@
"CLSI 2021" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2021" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 17 14 FALSE
"CLSI 2021" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2021" "DISK" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2021" "MIC" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Table 2A" "20ug/10ug" 18 13 FALSE
"CLSI 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "AMC" "Amoxicillin/clavulanic acid" "Table 2A" 8 32 FALSE
"CLSI 2020" "DISK" "B_AERMN" "Aeromonas" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 2" "20ug" 18 13 FALSE
@ -10927,8 +10927,8 @@
"CLSI 2020" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" "30ug" 21 17 FALSE
"CLSI 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "ATM" "Aztreonam" "Table 2A" 4 16 FALSE
"CLSI 2020" "DISK" "B_AERMN" "Aeromonas" 3 "ATM" "Aztreonam" "M45 Table 2" "30ug" 21 17 FALSE
@ -10971,10 +10971,10 @@
"CLSI 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" "10ug" 18 14 FALSE
"CLSI 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "CAT" "Cefetamet" "Table 2A" 4 16 FALSE
"CLSI 2020" "DISK" "B_HMPHL" "Haemophilus" 3 "CAT" "Cefetamet" "Table 2E" "10ug" 18 14 FALSE
@ -11658,10 +11658,10 @@
"CLSI 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2020" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2020" "DISK" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" "30ug" 16 12 FALSE
"CLSI 2020" "MIC" "B_[ORD]_ENTRBCTR" "Enterobacterales" 5 "MNO" "Minocycline" "Table 2A" 4 16 FALSE
"CLSI 2020" "DISK" "B_ACNTB" "Acinetobacter" 3 "MNO" "Minocycline" "Table 2B-2" "30ug" 16 12 FALSE
@ -12038,8 +12038,8 @@
"CLSI 2020" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2020" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 17 14 FALSE
"CLSI 2020" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2020" "DISK" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2020" "MIC" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2019" "DISK" "B_AERMN" "Aeromonas" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 2" "20ug" 18 13 FALSE
"CLSI 2019" "MIC" "B_AGGRG" "Aggregatibacter" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 9" 4 8 FALSE
"CLSI 2019" "MIC" "B_BRKHL_PSDM" "Burkholderia pseudomallei" 2 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 21" 8 32 FALSE
@ -12098,8 +12098,8 @@
"CLSI 2019" "MIC" "F_CANDD_KRUS" "Candida krusei" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "ANI" "Anidulafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pichia" 3 "ANI" "Anidulafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "B_AERMN" "Aeromonas" 3 "ATM" "Aztreonam" "M45 Table 2" "30ug" 21 17 FALSE
"CLSI 2019" "MIC" "B_AERMN" "Aeromonas" 3 "ATM" "Aztreonam" "M45 Table 3" 4 16 FALSE
"CLSI 2019" "MIC" "B_GRAMN" "(unknown Gram-negatives)" 2 "ATM" "Aztreonam" "Table 2B-5" 8 32 FALSE
@ -12140,10 +12140,10 @@
"CLSI 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 13 10 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "CAS" "Caspofungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 17 14 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pichia" 3 "CAS" "Caspofungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "B_HMPHL" "Haemophilus" 3 "CAT" "Cefetamet" "Table 2E" "10ug" 18 14 FALSE
"CLSI 2019" "MIC" "B_HMPHL" "Haemophilus" 3 "CAT" "Cefetamet" "Table 2E" 4 16 FALSE
"CLSI 2019" "DISK" "B_ACNTB" "Acinetobacter" 3 "CAZ" "Ceftazidime" "Table 2B-2" "30ug" 18 14 FALSE
@ -12740,10 +12740,10 @@
"CLSI 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 16 13 FALSE
"CLSI 2019" "MIC" "F_MYRZY_GLLR" "Meyerozyma guilliermondii" 2 "MIF" "Micafungin" "Table 1" 2 8 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 22 19 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pichia" 3 "MIF" "Micafungin" "Table 1" 0.25 1 FALSE
"CLSI 2019" "DISK" "B_ACNTB" "Acinetobacter" 3 "MNO" "Minocycline" "Table 2B-2" "30ug" 16 12 FALSE
"CLSI 2019" "MIC" "B_ACNTB" "Acinetobacter" 3 "MNO" "Minocycline" "Table 2B-2" 4 16 FALSE
"CLSI 2019" "DISK" "B_BRKHL_CEPC" "Burkholderia cepacia" 2 "MNO" "Minocycline" "Table 2B-3" "30ug" 19 14 FALSE
@ -13074,8 +13074,8 @@
"CLSI 2019" "MIC" "F_CANDD_PRPS" "Candida parapsilosis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2019" "DISK" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 17 14 FALSE
"CLSI 2019" "MIC" "F_CANDD_TRPC" "Candida tropicalis" 2 "VOR" "Voriconazole" "Table 1" 0.125 1 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pithomyces djbhatii" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2019" "DISK" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 15 12 FALSE
"CLSI 2019" "MIC" "F_PICHI" "Pichia" 3 "VOR" "Voriconazole" "Table 1" 0.5 2 FALSE
"CLSI 2018" "DISK" "B_AERMN" "Aeromonas" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 2" "20ug" 18 13 FALSE
"CLSI 2018" "MIC" "B_AERMN" "Aeromonas" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 2" 8 32 FALSE
"CLSI 2018" "MIC" "B_AGGRG" "Aggregatibacter" 3 "AMC" "Amoxicillin/clavulanic acid" "M45 Table 7" 4 8 FALSE

BIN
data-raw/rsi_translation.xlsx
View File

Binary file not shown.