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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'

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This commit is contained in:
dr. M.S. (Matthijs) Berends
2025-01-17 12:09:39 +01:00
parent 1697ad37ce
commit 92c4fc0f94
33 changed files with 1029 additions and 807 deletions
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6
inst/tinytest/test-ab_selectors.R
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@ -97,9 +97,13 @@ x <- data.frame(
)
# should have the first hits
expect_identical(
colnames(x[, aminoglycosides()]),
colnames(x[, aminoglycosides(return_all = FALSE)]),
c("gen", "tobra")
)
expect_identical(
colnames(x[, aminoglycosides()]),
c("gen", "genta", "J01GB03", "tobra", "Tobracin")
)
if (AMR:::pkg_is_available("dplyr", min_version = "1.0.0", also_load = TRUE)) {
expect_equal(example_isolates %>% select(administrable_per_os() & penicillins()) %>% ncol(), 5, tolerance = 0.5)