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<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.0.0.9004</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.0.0.9005</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -189,25 +189,25 @@
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<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">WHONET</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 500 × 53</span></span>
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<span class="r-out co"><span class="r-pr">#></span> Identif…¹ Speci…² Organ…³ Country Labor…⁴ Last …⁵ First…⁶ Sex Age Age c…⁷</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> fe41d7ba… <span style="text-decoration: underline;">1</span>748 SPN Belgium Nation… Abel B. F 68 55-74 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> 91f175ec… <span style="text-decoration: underline;">1</span>767 eco The Ne… Nation… Delacr… F. M 89 75+ </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> cc401505… <span style="text-decoration: underline;">1</span>343 eco The Ne… Nation… Steens… F. M 85 75+ </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> e864b692… <span style="text-decoration: underline;">1</span>894 MAP Denmark Nation… Beyers… L. M 62 55-74 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> 3d051fe3… <span style="text-decoration: underline;">1</span>739 PVU Belgium Nation… Hummel W. M 86 75+ </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> c80762a0… <span style="text-decoration: underline;">1</span>846 103 The Ne… Nation… Eikenb… J. F 53 25-54 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> 8022d372… <span style="text-decoration: underline;">1</span>628 103 Denmark Nation… Leclerc S. F 77 75+ </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> f3dc5f55… <span style="text-decoration: underline;">1</span>493 eco The Ne… Nation… Delacr… W. M 53 25-54 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> 15add38f… <span style="text-decoration: underline;">1</span>847 eco France Nation… Van La… S. F 63 55-74 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> fd41248d… <span style="text-decoration: underline;">1</span>458 eco Germany Nation… Moulin O. F 75 75+ </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># … with 490 more rows, 43 more variables: `Date of admission` <date>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> `Identification number` `Specimen number` Organism Country Laboratory</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> fe41d7bafa <span style="text-decoration: underline;">1</span>748 SPN Belgium National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> 91f175ec37 <span style="text-decoration: underline;">1</span>767 eco The Netherlands National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> cc4015056e <span style="text-decoration: underline;">1</span>343 eco The Netherlands National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> e864b692f5 <span style="text-decoration: underline;">1</span>894 MAP Denmark National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> 3d051fe345 <span style="text-decoration: underline;">1</span>739 PVU Belgium National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> c80762a08d <span style="text-decoration: underline;">1</span>846 103 The Netherlands National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> 8022d3727c <span style="text-decoration: underline;">1</span>628 103 Denmark National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> f3dc5f553d <span style="text-decoration: underline;">1</span>493 eco The Netherlands National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> 15add38f6c <span style="text-decoration: underline;">1</span>847 eco France National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> fd41248def <span style="text-decoration: underline;">1</span>458 eco Germany National …</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 490 more rows</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 48 more variables: `Last name` <chr>, `First name` <chr>, Sex <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># Age <dbl>, `Age category` <chr>, `Date of admission` <date>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># `Specimen date` <date>, `Specimen type` <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># `Specimen type (Numeric)` <dbl>, Reason <chr>, `Isolate number` <int>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># `Organism type` <chr>, Serotype <chr>, `Beta-lactamase` <lgl>, ESBL <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># Carbapenemase <lgl>, `MRSA screening test` <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># `Inducible clindamycin resistance` <lgl>, Comment <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># `Date of data entry` <date>, AMP_ND10 <sir>, AMC_ED20 <sir>, …</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># Carbapenemase <lgl>, `MRSA screening test` <lgl>, …</span></span>
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</code></pre></div>
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</div>
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</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
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