pages upload

This commit is contained in:
dr. M.S. (Matthijs) Berends 2018-12-30 07:44:11 +01:00
parent 92a32b62a7
commit cf44d94552
1 changed files with 39 additions and 32 deletions

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@ -2,44 +2,51 @@
# and https://github.com/jangorecki/r.gitlab.ci
# and https://docs.gitlab.com/ce/ci/yaml/README.html
# how the Docker+R images work: https://hub.docker.com/r/rocker/r-ver/
stages:
- build
- deploy
image: rocker/r-ver:3 # test on R v3.*.*
before_script:
- apt-get update
# install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev pandoc
- Rscript -e 'install.packages(c("devtools", "rlang"), repos = "https://cran.rstudio.com")'
- Rscript -e 'devtools::install_dev_deps(repos = "https://cran.rstudio.com")'
R 3:
image: rocker/r-ver:3 # test on R v3.*.*
allow_failure: true
script:
- apt-get update
# install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
- Rscript -e 'install.packages(c("devtools", "rlang"), repos = "https://cran.rstudio.com")'
- Rscript -e 'devtools::install_dev_deps(repos = "https://cran.rstudio.com")'
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes
- Rscript -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
# build package
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
# code coverage
- apt-get install --yes git
- Rscript -e 'cc <- covr::package_coverage(); covr::codecov(coverage = cc, token = "50ffa0aa-fee0-4f8b-a11d-8c7edc6d32ca"); cat("Code coverage:", covr::percent_coverage(cc))'
coverage: '/Code coverage: \d+\.\d+/'
artifacts:
paths:
- '*.Rcheck/*.log'
- '*.Rcheck/*.out'
# - '*.Rcheck/*.fail'
- '*.Rcheck/*.Rout'
name: 'Rcheck log'
expire_in: '1 month'
stage: build
allow_failure: true
script:
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes
- Rscript -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
# build package
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
# code coverage
- apt-get install --yes git
- Rscript -e 'cc <- covr::package_coverage(); covr::codecov(coverage = cc, token = "50ffa0aa-fee0-4f8b-a11d-8c7edc6d32ca"); cat("Code coverage:", covr::percent_coverage(cc))'
coverage: '/Code coverage: \d+\.\d+/'
artifacts:
paths:
- '*.Rcheck/*.log'
- '*.Rcheck/*.out'
# - '*.Rcheck/*.fail'
- '*.Rcheck/*.Rout'
name: 'Rcheck log'
expire_in: '1 month'
pages:
image: debian:buster-slim
stage: deploy
script:
- apt-get update && apt-get -y install libxml2-dev libssl-dev libcurl4-openssl-dev pandoc r-base
- Rscript -e "install.packages(c('pkgdown', 'devtools'), repos = 'https://cran.rstudio.com')"
- Rscript -e "devtools::install_dev_deps(repos = 'https://cran.rstudio.com')"
- Rscript -e "install.packages('pkgdown', repos = 'https://cran.rstudio.com')"
- Rscript -e "devtools::install(build = TRUE, upgrade = FALSE)"
# - R -e "pkgdown::build_favicon()"
- R -e "pkgdown::build_site(examples = FALSE)"
- R -e "pkgdown::build_site(examples = FALSE, override = list(destination = 'public'))"
artifacts:
paths:
- public