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(v3.0.1.9007) fix #246

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dr. M.S. (Matthijs) Berends
2026-01-06 23:08:50 +01:00
parent f6e28ac95c
commit cfbbfb4fa5
30 changed files with 628 additions and 444 deletions
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tests/testthat/test-amr_selectors.R
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@@ -52,9 +52,11 @@ test_that("test-amr selectors.R", {
expect_equal(ncol(example_isolates[, oxazolidinones(), drop = FALSE]), 1, tolerance = 0.5)
expect_equal(ncol(example_isolates[, penicillins(), drop = FALSE]), 7, tolerance = 0.5)
expect_equal(ncol(example_isolates[, phenicols(), drop = FALSE]), 1, tolerance = 0.5)
expect_equal(ncol(example_isolates[, phosphonics(), drop = FALSE]), 1, tolerance = 0.5)
expect_equal(ncol(example_isolates[, polymyxins(), drop = FALSE]), 1, tolerance = 0.5)
expect_equal(ncol(example_isolates[, quinolones(), drop = FALSE]), 2, tolerance = 0.5)
expect_equal(ncol(example_isolates[, rifamycins(), drop = FALSE]), 1, tolerance = 0.5)
expect_equal(ncol(example_isolates[, spiropyrimidinetriones(), drop = FALSE]), 0, tolerance = 0.5)
expect_equal(ncol(example_isolates[, streptogramins(), drop = FALSE]), 0, tolerance = 0.5)
expect_equal(ncol(example_isolates[, tetracyclines(), drop = FALSE]), 3, tolerance = 0.5)
expect_equal(ncol(example_isolates[, trimethoprims(), drop = FALSE]), 2, tolerance = 0.5)