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AMR
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simplify gitlab ci

This commit is contained in:
dr. M.S. (Matthijs) Berends 2018-10-31 13:42:35 +01:00
parent 84825b33b1
commit d3f5236690
2 changed files with 6 additions and 53 deletions
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57
.gitlab-ci.yml
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@ -4,17 +4,11 @@
# how the Docker+R images work: https://hub.docker.com/r/rocker/r-ver/
stages:
- build
- deploy
variables:
WARNINGS_ARE_ERRORS: 1
R 3:
image: rocker/r-ver:3 # rocker/r-base
stage: build
allow_failure: false
image: rocker/r-ver:3 # test on R v3.*.*
script:
- apt-get update
# install dependencies for package
@ -27,56 +21,15 @@ R 3:
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
- Rscript -e "options()" # to check for variables to circumvent testthat::skip_on_cran
# code coverage
- apt-get install --yes git
- Rscript -e 'cc <- covr::package_coverage(); covr::codecov(coverage = cc, token = "50ffa0aa-fee0-4f8b-a11d-8c7edc6d32ca"); cat("Code coverage:", covr::percent_coverage(cc))'
coverage: '/Code coverage: \d+\.\d+/'
artifacts:
paths:
- '*.Rcheck\**\*.log'
- '*.Rcheck\**\*.out'
- '*.Rcheck\**\*.fail'
- '*.Rcheck\**\*.Rout'
- '*.Rcheck/*.log'
- '*.Rcheck/*.out'
- '*.Rcheck/*.fail'
- '*.Rcheck/*.Rout'
name: 'Rcheck log'
expire_in: '1 month'
R 3.4:
image: rocker/r-ver:3.4 # rocker/r-base
stage: build
allow_failure: true
script:
- apt-get update
# install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
- R -e 'install.packages("devtools")'
- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes
- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
R 3.5:
image: rocker/r-ver:3.5 # rocker/r-base
stage: build
allow_failure: true
script:
- apt-get update
# install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
- R -e 'install.packages("devtools")'
- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes
- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
coverage_job:
# image: rocker/r-ver:3
stage: deploy
script:
- ls

2
README.md
View File

@ -146,7 +146,7 @@ This is the latest **development version**. Although it may contain bugfixes and
Development Test | Result | Reference
--- | :---: | ---
All functions checked on Linux and macOS | [![pipeline status](https://gitlab.com/msberends/AMR/badges/master/pipeline.svg)](https://gitlab.com/msberends/AMR/commits/master) | GitLab [[ref 1]](https://gitlab.com/msberends/AMR/pipelines)
All functions checked on Linux | [![pipeline status](https://gitlab.com/msberends/AMR/badges/master/pipeline.svg)](https://gitlab.com/msberends/AMR/commits/master) | GitLab CI [[ref 1]](https://gitlab.com/msberends/AMR/pipelines)
All functions checked on Windows | [![AppVeyor_Build](https://ci.appveyor.com/api/projects/status/gitlab/msberends/AMR?branch=master&svg=true)](https://ci.appveyor.com/project/msberends/amr-svxon) | Appveyor Systems Inc. [[ref 2]](https://ci.appveyor.com/project/msberends/amr-svxon)
Percentage of syntax lines checked | [![Code_Coverage](https://codecov.io/gl/msberends/AMR/branch/master/graph/badge.svg)](https://codecov.io/gl/msberends/AMR) | Codecov LLC [[ref 3]](https://codecov.io/gl/msberends/AMR)