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completely updated antibiotics

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dr. M.S. (Matthijs) Berends
2022-10-30 14:31:45 +01:00
parent 3d9faf89cf
commit d40e0ef20b
60 changed files with 102028 additions and 95116 deletions
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R/ab_selectors.R
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@ -541,7 +541,7 @@ ab_select_exec <- function(function_name,
info = FALSE, only_rsi_columns = only_rsi_columns,
sort = FALSE, fn = function_name
)
# untreatable drugs
if (only_treatable == TRUE) {
untreatable <- AMR_env$AB_lookup[which(AMR_env$AB_lookup$name %like% "-high|EDTA|polysorbate|macromethod|screening|/nacubactam"), "ab", drop = TRUE]