mirror of
https://github.com/msberends/AMR.git
synced 2025-07-09 06:02:01 +02:00
Built site for AMR: 1.8.2.9114@bc434db
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9111</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9114</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -193,41 +193,42 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 0.25 0.002 0.25 0.125 8 0.5 0.125 32 256 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 256 8 0.0625 2 0.5 8 0.001 128 256 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.01 128 0.002 0.01 0.001 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.002 0.005 256 0.002 128 16 0.025 0.025 8 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.001 1 0.0625 0.01 0.5 0.001 256 16 64 0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.01 1 0.002 2 32 </span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 28 47 9 12 25 45 46 47 21 41 31 50 48 49 30 37 42 41 35 28 48 40 44 44 29</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 39 34 35 50 45 12 10 28 49 18 26 21 49 41 20 32 13 28 10 16 36 21 44 27 39</span>
|
||||
<span class="r-in"><span><span class="fu">random_sir</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'sir'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] S S I R R I I I R R R R S S R R I I R S I R R I S</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] S R I R I R I I I S R R S S R R S R R S I S I R R</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.01 1 4 0.025 16 0.0625 2 16 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 8 0.0625 1 4 16 32 0.125 4 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.5 1 32 16 <=0.001 0.005 >=64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 128 0.005 8 1 8 0.25 2 4 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.002 0.125 0.25 2 1 0.0625 1 128 256 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 1 16 1 0.25 0.5 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 1 4 16 8 2 1 8 8 16 8 1 1 4 4 4 2 16 1 1 2 4 8 1 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 <=1 4 16 <=1 8 8 4 8 2 <=1 8 8 8 16 2 2 16 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [20] 2 4 4 16 16 <=1</span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 8 1 0.25 0.0625 1 4 8 2 0.25 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 8 0.25 4 0.025 0.25 0.25 16 0.125 1 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.025 4 0.5 16 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.25 0.5 0.25 0.5 4 0.0625 8 8 4 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.0625 0.125 8 0.125 0.5 8 0.5 8 0.0625 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.25 1 8 0.0625 0.0625</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 19 49 18 32 43 23 48 48 45 26 18 18 34 34 43 16 43 44 49 47 35 39 32 19 23</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 47 33 27 16 18 9 27 18 41 23 46 27 46 32 43 33 49 47 24 25 50 50 47 26 13</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 12 16 11 14 12 13 11 13 15 17 16 14 12 12 16 15 14 13 15 17 16 15 17 14</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 12 13 15 14 16 13 11 13 13 16 11 17 15 17 14 15 11 15 11 13 15 16 15 16 14</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 19 18 24 25 20 16 15 20 19 18 18 17 24 21 24 16 24 22 19 18 26 27 27 25 16</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 17 27 20 17 25 23 24 20 24 25 17 20 24 15 18 22 20 21 22 27 22 16 21 21 17</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user