P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-09 06:51:48 +02:00
Code Releases Activity

add labels_rsi_count

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2018-09-16 22:11:17 +02:00
parent b792a2754e
commit db14781593
16 changed files with 110 additions and 29 deletions
Download Patch File Download Diff File Expand all files Collapse all files

2
R/mo_property.R
View File

@ -187,7 +187,7 @@ mo_aerobic <- function(x) {
#' @export
mo_property <- function(x, property = 'fullname', Becker = FALSE, Lancefield = FALSE, language = NULL) {
property <- tolower(property[1])
if (!property %in% colnames(microorganisms)) {
if (!property %in% colnames(AMR::microorganisms)) {
stop("invalid property: ", property, " - use a column name of the `microorganisms` data set")
}
result1 <- as.mo(x = x, Becker = Becker, Lancefield = Lancefield) # this will give a warning if x cannot be coerced