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(v1.1.0.9018) as.ab() update, added ab_url()

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dr. M.S. (Matthijs) Berends
2020-05-22 20:29:55 +02:00
parent e467cc103e
commit f5ff2e6634
13 changed files with 21 additions and 14 deletions
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2
DESCRIPTION
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Package: AMR
Version: 1.1.0.9017
Version: 1.1.0.9018
Date: 2020-05-22
Title: Antimicrobial Resistance Analysis
Authors@R: c(

2
NEWS.md
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# AMR 1.1.0.9017
# AMR 1.1.0.9018
## <small>Last updated: 22-May-2020</small>
### Breaking

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R/ab_property.R
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#' @param language language of the returned text, defaults to system language (see [get_locale()]) and can also be set with `getOption("AMR_locale")`. Use `language = NULL` or `language = ""` to prevent translation.
#' @param administration way of administration, either `"oral"` or `"iv"`
#' @param units a logical to indicate whether the units instead of the DDDs itself must be returned, see Examples
#' @param open browse the URL using [utils::browseURL()]
#' @param ... other parameters passed on to [as.ab()]
#' @details All output will be [translate]d where possible.
#'

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docs/404.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="https://msberends.gitlab.io/AMR/index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

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docs/LICENSE-text.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

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docs/articles/index.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

2
docs/authors.html
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@@ -81,7 +81,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

2
docs/index.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

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docs/news/index.html
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@@ -81,7 +81,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>
@@ -229,9 +229,9 @@
<small>Source: <a href='https://gitlab.com/msberends/AMR/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div>
<div id="amr-1-1-0-9017" class="section level1">
<h1 class="page-header" data-toc-text="1.1.0.9017">
<a href="#amr-1-1-0-9017" class="anchor"></a>AMR 1.1.0.9017<small> Unreleased </small>
<div id="amr-1-1-0-9018" class="section level1">
<h1 class="page-header" data-toc-text="1.1.0.9018">
<a href="#amr-1-1-0-9018" class="anchor"></a>AMR 1.1.0.9018<small> Unreleased </small>
</h1>
<div id="last-updated-22-may-2020" class="section level2">
<h2 class="hasAnchor">

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docs/pkgdown.yml
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@@ -10,7 +10,7 @@ articles:
WHONET: WHONET.html
benchmarks: benchmarks.html
resistance_predict: resistance_predict.html
last_built: 2020-05-22T18:14Z
last_built: 2020-05-22T18:29Z
urls:
reference: https://msberends.gitlab.io/AMR/reference
article: https://msberends.gitlab.io/AMR/articles

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docs/reference/ab_property.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>
@@ -288,6 +288,10 @@
<th>units</th>
<td><p>a logical to indicate whether the units instead of the DDDs itself must be returned, see Examples</p></td>
</tr>
<tr>
<th>open</th>
<td><p>browse the URL using <code><a href='https://rdrr.io/r/utils/browseURL.html'>utils::browseURL()</a></code></p></td>
</tr>
<tr>
<th>property</th>
<td><p>one of the column names of one of the <a href='antibiotics.html'>antibiotics</a> data set</p></td>

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docs/reference/index.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9017</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.1.0.9018</span>
</span>
</div>

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man/ab_property.Rd
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@@ -56,6 +56,8 @@ ab_property(x, property = "name", language = get_locale(), ...)
\item{units}{a logical to indicate whether the units instead of the DDDs itself must be returned, see Examples}
\item{open}{browse the URL using \code{\link[utils:browseURL]{utils::browseURL()}}}
\item{property}{one of the column names of one of the \link{antibiotics} data set}
}
\value{