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(v3.0.1.9006) Fix website

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dr. M.S. (Matthijs) Berends
2025-12-21 12:29:46 +01:00
parent 151af21f38
commit f6e28ac95c
4 changed files with 7 additions and 3 deletions
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4
.github/workflows/todo-tracker.yml vendored
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@@ -43,8 +43,12 @@ jobs:
- name: Generate TODO list from R/ - name: Generate TODO list from R/
run: | run: |
export TZ=Europe/Amsterdam
last_updated=$(date +"%e %B %Y %H:%M:%S %Z" | sed 's/^ *//')
echo "## \`TODO\` Report" > todo.md echo "## \`TODO\` Report" > todo.md
echo "" >> todo.md echo "" >> todo.md
echo "**Last Updated: ${last_updated}**" >> todo.md
echo "" >> todo.md
echo "_This overview is automatically updated on each push to \`main\`. It provides an automated overview of all mentions of the text \`TODO\`._" >> todo.md echo "_This overview is automatically updated on each push to \`main\`. It provides an automated overview of all mentions of the text \`TODO\`._" >> todo.md
echo "" >> todo.md echo "" >> todo.md
todos=$(grep -rn --include=\*.{R,Rmd,yaml,yml,md,css,js} --exclude={todo-tracker.yml,todo.md} "TODO" . || true) todos=$(grep -rn --include=\*.{R,Rmd,yaml,yml,md,css,js} --exclude={todo-tracker.yml,todo.md} "TODO" . || true)

2
DESCRIPTION
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@@ -1,5 +1,5 @@
Package: AMR Package: AMR
Version: 3.0.1.9005 Version: 3.0.1.9006
Date: 2025-12-21 Date: 2025-12-21
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)

2
NEWS.md
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@@ -1,4 +1,4 @@
# AMR 3.0.1.9005 # AMR 3.0.1.9006
### New ### New
* Integration with the **tidymodels** framework to allow seamless use of SIR, MIC and disk data in modelling pipelines via `recipes` * Integration with the **tidymodels** framework to allow seamless use of SIR, MIC and disk data in modelling pipelines via `recipes`

2
_pkgdown.yml
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@@ -234,7 +234,7 @@ reference:
- "`antimicrobials`" - "`antimicrobials`"
- "`clinical_breakpoints`" - "`clinical_breakpoints`"
- "`example_isolates`" - "`example_isolates`"
# TODO - "`esbl_isolates`" - "`esbl_isolates`"
- "`microorganisms.codes`" - "`microorganisms.codes`"
- "`microorganisms.groups`" - "`microorganisms.groups`"
- "`intrinsic_resistant`" - "`intrinsic_resistant`"