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eucast updates

This commit is contained in:
2018-11-01 17:06:08 +01:00
parent d3f5236690
commit f7687557c9
5 changed files with 147 additions and 76 deletions

View File

@@ -13,6 +13,7 @@
* Better error handling when rules cannot be applied (i.e. new values could not be inserted)
* The number of affected values will now only be measured once per row/column combination
* Data set `septic_patients` now reflects these changes
* Small fixes to EUCAST clinical breakpoint rules
* Tremendous speed improvement for `as.mo` (and subsequently all `mo_*` functions), as empty values wil be ignored *a priori*
* Fewer than 3 characters as input for `as.mo` will return NA
* Added parameter `combine_IR` (TRUE/FALSE) to functions `portion_df` and `count_df`, to indicate that all values of I and R must be merged into one, so the output only consists of S vs. IR (susceptible vs. non-susceptible)