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mirror of https://github.com/msberends/AMR.git synced 2024-12-27 22:06:12 +01:00
Commit Graph

50 Commits

Author SHA1 Message Date
1b499bf012 fixes 2023-07-10 17:02:28 +02:00
a4e2e25e3f reftbl in plots, speedup for as.sir() and mo_validate 2023-07-10 16:43:46 +02:00
acb534102b new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
9591688811 documentation update 2023-05-27 10:39:22 +02:00
80cfc503c2 check for 2.0 2023-03-12 13:02:37 +01:00
262598b8d7 support for old rsi arguments 2023-03-11 14:24:34 +01:00
2c5a9bb622 new relative episode determination in get_episode(), fix for plotting disk/MIC values 2023-02-24 17:06:30 +01:00
e70f2cd32c knitr format 2023-02-23 16:27:40 +01:00
dad25302f2 make rsi work in more cases, documentation update 2023-02-22 14:38:57 +01:00
c740967cf2 fix for binding rows 2023-02-12 11:20:14 +01:00
c51fb24363 pm_bind_rows 2023-02-11 22:28:48 +01:00
2007c3eef3 bind_rows 2023-02-10 17:09:48 +01:00
1a0dc4bf46 revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
9e99e66f01 use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
eef00069fd add all options to documentation 2023-01-23 20:07:57 +01:00
Dr. Matthijs Berends
98e62c9af2
Replace RSI with SIR 2023-01-21 23:47:20 +01:00
593d740b84 documentation, file permissions 2023-01-19 12:54:53 +01:00
f619fb683b support new mo codes 2022-12-27 15:16:15 +01:00
7ca44fb756 cleanup and new intro logo 2022-11-13 13:44:25 +01:00
Dr. Matthijs Berends
cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
fbd5d32541 small fixes 2022-08-29 09:35:36 +02:00
4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
bdbc112f99 website update 2022-08-21 17:22:34 +02:00
952d16de33 new, automated website 2022-08-21 16:37:20 +02:00
3f2f60ab77 language updates 2022-08-19 12:33:14 +02:00
859224e9d0 (v1.8.1.9006) added EUCAST 2022 and CLSI 2022 2022-05-10 21:34:30 +02:00
25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
578e7dfee9 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
56f1ce328a (v1.7.1.9067) Support for Swedish and Russian 2021-12-12 09:42:03 +01:00
694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
9a2c431e16 (v1.7.1.9053) fortify() methods 2021-11-01 13:51:13 +01:00
4e1efd902c (v1.7.1.9022) rely on vctrs for ab selectors 2021-07-23 21:42:11 +02:00
0ec81cc12e (v1.7.1.9021) autoplot generics 2021-07-12 22:12:28 +02:00
6838f03bde (v1.7.1.9020) autoplot generics 2021-07-12 20:24:49 +02:00
fc946564d1 (v1.7.1.9019) Morganella MIC in EUCAST 2021 2021-07-12 12:28:41 +02:00
16b4c74d44 (v1.7.1.9013) temp fix for ggplot2 bug #4511 2021-07-04 22:10:46 +02:00
d04e83f494 (v1.7.1.9005) ab class selectors for R-3.0 and R-3.1 2021-06-22 12:16:42 +02:00
99be4c7e7e (v1.7.1.9002) ab class selectors update 2021-06-14 22:04:04 +02:00
a13fd98e8b (v1.6.0.9063) prepare new release 2021-05-24 09:00:11 +02:00
29dbfa2f49 (v1.6.0.9021) join functions update 2021-05-12 18:15:03 +02:00
e405de079c (v1.6.0.9014) as.rsi() for numeric values 2021-04-30 13:18:48 +02:00
70b803dbb6 (v1.6.0.9008) unlike, bugfix for col_mo naming 2021-04-23 09:59:36 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules 2021-04-07 08:37:42 +02:00
1bbf409fe5 (v1.5.0.9033) as.rsi fix 2021-03-07 16:15:43 +01:00
850c123de7 (v1.5.0.9032) All group generics for MICs 2021-03-07 13:52:39 +01:00
91dd755cac (v1.5.0.9031) math processing of MICs 2021-03-05 15:36:39 +01:00
ddf88345f1 (v1.5.0.9028) Updated taxonomy until March 2021 2021-03-04 23:28:32 +01:00
41f94cde97 (v1.5.0.9027) website update 2021-02-26 12:11:29 +01:00
1737d56ae4 (v1.5.0.9026) vignette update, support for GISA 2021-02-25 12:31:12 +01:00
a673407904 (v1.5.0.9025) big plot and ggplot generics update 2021-02-25 10:33:08 +01:00