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mirror of https://github.com/msberends/AMR.git synced 2025-07-08 04:31:49 +02:00
Commit Graph

440 Commits

Author SHA1 Message Date
72db2b2562 (v3.0.0.9003) eucast_rules fix, new tidymodels integration 2025-06-13 14:03:21 +02:00
d384b492cf (v2.1.1.9289) unit test fix 2025-06-01 16:00:12 +02:00
46f80b1378 (v2.1.1.9288) mdro fix 2025-06-01 15:35:04 +02:00
4b171745de (v2.1.1.9276) mdro() fix 2025-05-15 10:39:48 +02:00
48a59ee31a (v2.1.1.9275) include guideline name in MDRO verbose output 2025-05-13 18:56:12 +02:00
7d45ca9fbf (v2.1.1.9274) Improve is_sir_eligible, rename verbose MDRO output 2025-05-12 12:35:11 +02:00
2461631bce (v2.1.1.9268) WISCA vignette, antibiogram sorting, fix translations 2025-05-01 14:45:21 +02:00
5e6bbdf3d1 (v2.1.1.9267) update ATCs 2025-05-01 11:48:49 +02:00
d2b3937a90 (v2.1.1.9257) adjust unit tests 2025-04-27 09:58:19 +02:00
f340e257fa (v2.1.1.9256) unit tests 2025-04-26 21:29:50 +02:00
4e7fca3b38 (v2.1.1.9253) parallel computing 2025-04-26 15:47:00 +02:00
be13934fe7 (v2.1.1.9249) unit test 2025-04-20 17:49:47 +02:00
492fe6872f (v2.1.1.9244) automated GPT training data 2025-04-19 15:57:12 +02:00
579025f678 (v2.1.1.9241) fix sir 2025-04-18 13:25:59 +02:00
40d7a971c3 (v2.1.1.9236) documentation 2025-04-12 11:46:42 +02:00
36fd99e1f4 (v2.1.1.9235) New website! 2025-04-08 15:54:30 +01:00
b972bbb96f (v2.1.1.9230) deprecated resistance_predict(), data set folder name without space 2025-03-28 16:48:56 +01:00
bd873ac1bc (v2.1.1.9229) unit tests 2025-03-28 11:40:09 +01:00
49da312506 (v2.1.1.9228) repo cleaning 2025-03-28 11:17:49 +01:00
969a42cc8c (v2.1.1.9226) update intrinsic_resistant, unit test fixes 2025-03-27 15:20:22 +01:00
8deaf2c8eb (v2.1.1.9224) skip tests on cran 2025-03-20 23:29:21 +01:00
58d7aa8790 (v2.1.1.9199) fix eucast 2025-03-14 13:43:22 +01:00
861331b1df (v2.1.1.9196) fix eucast, unit tests 2025-03-13 15:38:39 +01:00
9aab129ea6 (v2.1.1.9195) add BTL-S, fix ranks in unknown microorganisms 2025-03-13 14:30:14 +01:00
a7ef22a21e (v2.1.1.9194) new argument for missing R breakpoints - updated from WHONET 2025-03-12 16:24:38 +01:00
067a8aca66 (v2.1.1.9192) fix fluoroquinolones and add bleomycin 2025-03-10 17:04:35 +01:00
32024e597a (v2.1.1.9191) unit tests 2025-03-10 12:16:45 +01:00
245483e41c (v2.1.1.9188) fix antibiogram plot 2025-03-07 23:01:25 +01:00
f7938289eb (v2.1.1.9186) replace antibiotics with antimicrobials! 2025-03-07 20:43:26 +01:00
e28dd86c43 (v2.1.1.9183) unit test for older R versions 2025-03-03 14:54:42 +01:00
9a9468fa84 (v2.1.1.9182) fix AMR selectors for tidymodels, add unit tests 2025-03-03 12:59:27 +01:00
07efc292bc (v2.1.1.9163) cleanup 2025-02-27 14:04:29 +01:00
68efddab3d unit tests 2025-02-26 22:26:42 +01:00
1a43882583 ab fix 2025-02-26 21:34:07 +01:00
22e66741cc (v2.1.1.9160) cleanup 2025-02-26 20:28:33 +01:00
0c3ea4b538 (v2.1.1.9159) new approach as.ab() 2025-02-26 19:23:54 +01:00
aa8f6af185 (v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro 2025-02-23 11:18:08 +01:00
671d657fd8 (v2.1.1.9152) MIC plot fix 2025-02-18 08:07:02 +01:00
9650545d6e (v2.1.1.9150) unit tests 2025-02-15 13:40:51 +01:00
9d636983ac (v2.1.1.9148) scale fix, antibiogram fix 2025-02-15 12:38:29 +01:00
d94efb0f5e (v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values 2025-02-14 14:16:46 +01:00
bd2887bcd4 (v2.1.1.9146) new scale_*_sir() functions 2025-02-13 19:47:57 +01:00
cc2bb151ab (v2.1.1.9142) unit test fix 2025-02-07 19:03:02 +01:00
8ba2e4ed94 (v2.1.1.9141) new AMR selectors, eucast overwrite arg 2025-02-07 18:01:22 +01:00
baea4323c7 (v2.1.1.9140) WISCA fix 2025-02-05 20:48:35 +01:00
d84033bbcb (v2.1.1.9139) unit test 2025-02-01 11:10:42 +01:00
6a206bed12 (v2.1.1.9138) unit tests 2025-01-31 23:06:45 +01:00
22afd918e6 (v2.1.1.9136) console colours, updated Suggests, added as.ab() improvement 2025-01-31 16:01:52 +01:00
f03933940c (v2.1.1.9131) implement testthat 2025-01-27 21:43:10 +01:00
d8c91d5876 (v1.6.0.9031) tinytest unit tests 2021-05-15 21:36:22 +02:00