Commit Graph

33 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends 127892430d (v2.1.1.9078) 12 new formatting formats for `antibiogram()`, prepare for Bayesian WISCA 2024-09-22 11:45:51 +02:00
dr. M.S. (Matthijs) Berends 640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends 9bf7584d58 (v2.1.1.9049) new 2024 breakpoints, add `AMO`, set NI instead of N 2024-06-14 22:39:01 +02:00
dr. M.S. (Matthijs) Berends 08a27922a8 new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
dr. M.S. (Matthijs) Berends 35f095cceb fixes #148 2024-04-23 09:34:05 +02:00
dr. M.S. (Matthijs) Berends acb534102b new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
dr. M.S. (Matthijs) Berends 9591688811 documentation update 2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends 549790c2a6 website 2023-03-20 21:59:50 +01:00
dr. M.S. (Matthijs) Berends 80cfc503c2 check for 2.0 2023-03-12 13:02:37 +01:00
dr. M.S. (Matthijs) Berends 262598b8d7 support for old rsi arguments 2023-03-11 14:24:34 +01:00
dr. M.S. (Matthijs) Berends 92029c9e95 remove note 2023-02-24 10:31:36 +01:00
dr. M.S. (Matthijs) Berends 049baf0a71 fix for antibiograms on R < 3.5 2023-02-24 09:43:10 +01:00
dr. M.S. (Matthijs) Berends e70f2cd32c knitr format 2023-02-23 16:27:40 +01:00
dr. M.S. (Matthijs) Berends a84101db08 N for only 1 AB in 2023-02-22 16:26:13 +01:00
dr. M.S. (Matthijs) Berends 551aaf6517 auto-remove missing ABs in `antibiogram()` 2023-02-22 16:00:52 +01:00
dr. M.S. (Matthijs) Berends c2cfc5ef84 fix for `antibiogram()`, transform `WHONET` data set to `sir` 2023-02-22 15:40:05 +01:00
dr. M.S. (Matthijs) Berends dad25302f2 make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
dr. M.S. (Matthijs) Berends 8d902410f9 unit tests 2023-02-18 14:56:06 +01:00
dr. M.S. (Matthijs) Berends ba255ddb00 website 2023-02-18 11:57:17 +01:00
dr. M.S. (Matthijs) Berends e890360986 website syntax update 2023-02-17 11:39:00 +01:00
dr. M.S. (Matthijs) Berends 714a048fa9 italicise antibiogram 2023-02-17 09:42:51 +01:00
dr. M.S. (Matthijs) Berends ef716f6ee3 doc fix 2023-02-15 17:16:40 +01:00
dr. M.S. (Matthijs) Berends 3396236eef unit test fixes 2023-02-13 16:56:25 +01:00
dr. M.S. (Matthijs) Berends b6d2b1398d Fix for `antibiogram()` in R <=3.4 2023-02-13 10:21:43 +01:00
dr. M.S. (Matthijs) Berends 45a9697c84 unit tests 2023-02-12 17:10:48 +01:00
dr. M.S. (Matthijs) Berends c740967cf2 fix for binding rows 2023-02-12 11:20:14 +01:00
dr. M.S. (Matthijs) Berends c51fb24363 pm_bind_rows 2023-02-11 22:28:48 +01:00
dr. M.S. (Matthijs) Berends 2007c3eef3 bind_rows 2023-02-10 17:09:48 +01:00
dr. M.S. (Matthijs) Berends bc434db835 bring back `antibiogram()`, without deps 2023-02-10 16:18:00 +01:00
dr. M.S. (Matthijs) Berends 1a0dc4bf46 revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
dr. M.S. (Matthijs) Berends aa48c6bf53 pm fixes 2023-02-08 16:51:41 +01:00
dr. M.S. (Matthijs) Berends f7dd890b79 fixes 2023-02-06 12:38:52 +01:00
dr. M.S. (Matthijs) Berends 9e99e66f01 use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00