dr. M.S. (Matthijs) Berends
4e40e42011
(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
2020-09-18 16:05:53 +02:00
dr. M.S. (Matthijs) Berends
1b65d76cfb
(v1.2.0.9037) survey on website
2020-07-28 18:39:57 +02:00
dr. M.S. (Matthijs) Berends
76fc8e1b14
(v1.2.0.9026) move to github
2020-07-08 14:48:06 +02:00
dr. M.S. (Matthijs) Berends
e467cc103e
(v1.1.0.9017) as.ab() update, added ab_url()
2020-05-22 20:15:19 +02:00
dr. M.S. (Matthijs) Berends
bf0402a653
(v1.1.0.9009) lose dependencies
2020-05-18 10:30:53 +02:00
dr. M.S. (Matthijs) Berends
7f3da74b17
(v1.1.0.9004) lose dependencies
2020-05-16 13:05:47 +02:00
dr. M.S. (Matthijs) Berends
c2ffbd9f95
(v1.0.1.9009) prepare for next release
2020-04-15 11:30:28 +02:00
dr. M.S. (Matthijs) Berends
0d5e78b2cf
(v1.0.0.9007) small doc fix
2020-02-22 17:03:47 +01:00
dr. M.S. (Matthijs) Berends
ea32e9916a
(v1.0.0.9005) info printing only in interactive mode
2020-02-21 21:13:38 +01:00
dr. M.S. (Matthijs) Berends
5e2b294351
(v0.9.0.9026) update documentation
2020-02-17 14:38:01 +01:00
dr. M.S. (Matthijs) Berends
9feef53bde
(v0.8.0.9037) complete documentation rewrite
2019-11-28 23:00:37 +01:00
dr. M.S. (Matthijs) Berends
c5f00f4a9f
(v0.8.0.9036) complete documentation rewrite
2019-11-28 22:32:17 +01:00
dr. M.S. (Matthijs) Berends
54b6322056
(v0.8.0.9028) examples fix
2019-11-10 13:17:20 +01:00
dr. M.S. (Matthijs) Berends
e2d05cb1b0
(v0.8.0.9017) keywords update
2019-11-06 14:43:23 +01:00
dr. M.S. (Matthijs) Berends
00cdb498a0
(v0.7.1.9102) lintr
2019-10-11 17:21:02 +02:00
dr. M.S. (Matthijs) Berends
248638ad91
(v0.7.1.9065) bug-drug fix
2019-08-27 22:41:09 +02:00
dr. M.S. (Matthijs) Berends
93be16484b
(v0.7.1.9063) septic_patients -> example_isolates
2019-08-27 16:45:42 +02:00
dr. M.S. (Matthijs) Berends
920212e815
(v0.7.1.9056) mo and ab subsetting
2019-08-14 14:57:06 +02:00
dr. M.S. (Matthijs) Berends
1ce4b72dd2
(v0.7.1.9031) include_unknown for first_isolate()
2019-08-08 22:39:42 +02:00
dr. M.S. (Matthijs) Berends
493ae2ba0c
(v0.6.1.9044) first_isolate fix for species
2019-05-31 14:25:11 +02:00
dr. M.S. (Matthijs) Berends
cc403169c6
first isolate missing dates fix
2019-05-13 14:56:23 +02:00
dr. M.S. (Matthijs) Berends
68cc7ef0d0
new antibiotics
2019-05-10 16:44:59 +02:00
dr. M.S. (Matthijs) Berends
461eec9bac
cfta streptococci, codecov.yml
2019-04-09 14:59:17 +02:00
dr. M.S. (Matthijs) Berends
68a9a35ed6
algorithm update
2019-02-21 18:55:52 +01:00
dr. M.S. (Matthijs) Berends
3efb54d016
freq update
2019-01-29 20:20:09 +01:00
dr. M.S. (Matthijs) Berends
046d195064
resistance predict
2019-01-15 12:45:24 +01:00
dr. M.S. (Matthijs) Berends
6b2d464f8c
big website update, licence txt update
2019-01-02 23:24:07 +01:00
dr. M.S. (Matthijs) Berends
0b8084871d
dplyr 0.8.0 support, fixes #7
2018-12-22 22:39:34 +01:00
dr. M.S. (Matthijs) Berends
81af7be36e
note about portions
2018-12-14 07:23:25 +01:00
dr. M.S. (Matthijs) Berends
5ab7eb07bc
keyab automatic
2018-12-10 15:14:29 +01:00
dr. M.S. (Matthijs) Berends
e601fd259a
test syntax fix
2018-11-01 20:50:10 +01:00
dr. M.S. (Matthijs) Berends
7997de6a6d
mdro and 1st isolate improvements
2018-10-23 11:15:05 +02:00
dr. M.S. (Matthijs) Berends
5965d3c794
replaced bactid by mo
2018-08-31 13:36:19 +02:00
dr. M.S. (Matthijs) Berends
ce2cdb9309
support groups for portion_df, update README
2018-08-12 22:34:03 +02:00
dr. M.S. (Matthijs) Berends
1ba7d883fe
new ggplot enhancement
2018-08-11 21:30:00 +02:00
dr. M.S. (Matthijs) Berends
53fa198e35
new portion functions
2018-08-10 15:01:05 +02:00
dr. M.S. (Matthijs) Berends
826694323b
new functions R, RI, SI, S
2018-07-29 22:14:51 +02:00
dr. M.S. (Matthijs) Berends
498e88b5cf
improvement for forecasting resistance
2018-07-26 16:30:42 +02:00
dr. M.S. (Matthijs) Berends
d9e204031d
update to septic_patients, speed improvements
2018-07-25 14:17:04 +02:00
dr. M.S. (Matthijs) Berends
8421638b60
new class bactid
2018-07-23 14:14:03 +02:00
dr. M.S. (Matthijs) Berends
2a4d759fbc
check fails
2018-07-17 14:48:11 +02:00
dr. M.S. (Matthijs) Berends
5cb9c541f8
new algorithm key abs
2018-07-17 13:02:05 +02:00
dr. M.S. (Matthijs) Berends
0a5898b17d
fix for printing tibbles, improve guess_bactid
2018-06-08 12:06:54 +02:00
dcc26dd942
Update freq function
2018-05-22 16:34:22 +02:00
dr. M.S. (Matthijs) Berends
0b22ddef8e
more unit tests
2018-04-20 13:45:34 +02:00
dr. M.S. (Matthijs) Berends
c182a9673d
fix clipboard on linux
2018-04-02 11:11:21 +02:00
dr. M.S. (Matthijs) Berends
53464ff1c8
- For functions `first_isolate`, `EUCAST_rules` the antibiotic column names are case-insensitive
...
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
dr. M.S. (Matthijs) Berends
fe803f7279
use guess_bactid for GLIMS codes
2018-03-19 21:23:21 +01:00
dr. M.S. (Matthijs) Berends
dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be `points` or `keyantibiotics, see `?first_isolate`
...
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
dr. M.S. (Matthijs) Berends
04fc3573ec
add barplots
2018-03-13 14:34:10 +01:00
uscloud