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22 Commits

Author SHA1 Message Date
ce2cdb9309 support groups for portion_df, update README 2018-08-12 22:34:03 +02:00
1ba7d883fe new ggplot enhancement 2018-08-11 21:30:00 +02:00
53fa198e35 new portion functions 2018-08-10 15:01:05 +02:00
826694323b new functions R, RI, SI, S 2018-07-29 22:14:51 +02:00
498e88b5cf improvement for forecasting resistance 2018-07-26 16:30:42 +02:00
d9e204031d update to septic_patients, speed improvements 2018-07-25 14:17:04 +02:00
8421638b60 new class bactid 2018-07-23 14:14:03 +02:00
2a4d759fbc check fails 2018-07-17 14:48:11 +02:00
5cb9c541f8 new algorithm key abs 2018-07-17 13:02:05 +02:00
0a5898b17d fix for printing tibbles, improve guess_bactid 2018-06-08 12:06:54 +02:00
uscloud
dcc26dd942 Update freq function 2018-05-22 16:34:22 +02:00
0b22ddef8e more unit tests 2018-04-20 13:45:34 +02:00
c182a9673d fix clipboard on linux 2018-04-02 11:11:21 +02:00
53464ff1c8
- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
fe803f7279
use guess_bactid for GLIMS codes 2018-03-19 21:23:21 +01:00
dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be points or keyantibiotics, see ?first_isolate`
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
04fc3573ec
add barplots 2018-03-13 14:34:10 +01:00
e4b371d30a
add MIC values
add badges to readme
2018-03-13 11:57:30 +01:00
34e70a65ed
added septic_patients 2018-02-27 20:01:02 +01:00
6fa05fe33b
first isolates 2018-02-26 14:06:31 +01:00
d8da8daf9a
First CRAN submission edits 2018-02-22 20:48:48 +01:00
62304dc23f
first commit 2018-02-21 11:52:31 +01:00