e2d05cb1b0
(v0.8.0.9017) keywords update
2019-11-06 14:43:23 +01:00
00cdb498a0
(v0.7.1.9102) lintr
2019-10-11 17:21:02 +02:00
248638ad91
(v0.7.1.9065) bug-drug fix
2019-08-27 22:41:09 +02:00
93be16484b
(v0.7.1.9063) septic_patients -> example_isolates
2019-08-27 16:45:42 +02:00
920212e815
(v0.7.1.9056) mo and ab subsetting
2019-08-14 14:57:06 +02:00
1ce4b72dd2
(v0.7.1.9031) include_unknown for first_isolate()
2019-08-08 22:39:42 +02:00
493ae2ba0c
(v0.6.1.9044) first_isolate fix for species
2019-05-31 14:25:11 +02:00
cc403169c6
first isolate missing dates fix
2019-05-13 14:56:23 +02:00
68cc7ef0d0
new antibiotics
2019-05-10 16:44:59 +02:00
461eec9bac
cfta streptococci, codecov.yml
2019-04-09 14:59:17 +02:00
68a9a35ed6
algorithm update
2019-02-21 18:55:52 +01:00
3efb54d016
freq update
2019-01-29 20:20:09 +01:00
046d195064
resistance predict
2019-01-15 12:45:24 +01:00
6b2d464f8c
big website update, licence txt update
2019-01-02 23:24:07 +01:00
0b8084871d
dplyr 0.8.0 support, fixes #7
2018-12-22 22:39:34 +01:00
81af7be36e
note about portions
2018-12-14 07:23:25 +01:00
5ab7eb07bc
keyab automatic
2018-12-10 15:14:29 +01:00
e601fd259a
test syntax fix
2018-11-01 20:50:10 +01:00
7997de6a6d
mdro and 1st isolate improvements
2018-10-23 11:15:05 +02:00
5965d3c794
replaced bactid by mo
2018-08-31 13:36:19 +02:00
ce2cdb9309
support groups for portion_df, update README
2018-08-12 22:34:03 +02:00
1ba7d883fe
new ggplot enhancement
2018-08-11 21:30:00 +02:00
53fa198e35
new portion functions
2018-08-10 15:01:05 +02:00
826694323b
new functions R, RI, SI, S
2018-07-29 22:14:51 +02:00
498e88b5cf
improvement for forecasting resistance
2018-07-26 16:30:42 +02:00
d9e204031d
update to septic_patients, speed improvements
2018-07-25 14:17:04 +02:00
8421638b60
new class bactid
2018-07-23 14:14:03 +02:00
2a4d759fbc
check fails
2018-07-17 14:48:11 +02:00
5cb9c541f8
new algorithm key abs
2018-07-17 13:02:05 +02:00
0a5898b17d
fix for printing tibbles, improve guess_bactid
2018-06-08 12:06:54 +02:00
uscloud
dcc26dd942
Update freq function
2018-05-22 16:34:22 +02:00
0b22ddef8e
more unit tests
2018-04-20 13:45:34 +02:00
c182a9673d
fix clipboard on linux
2018-04-02 11:11:21 +02:00
53464ff1c8
- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive
...
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
fe803f7279
use guess_bactid for GLIMS codes
2018-03-19 21:23:21 +01:00
dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be points or keyantibiotics, see ?first_isolate`
...
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
04fc3573ec
add barplots
2018-03-13 14:34:10 +01:00
e4b371d30a
add MIC values
...
add badges to readme
2018-03-13 11:57:30 +01:00
34e70a65ed
added septic_patients
2018-02-27 20:01:02 +01:00
6fa05fe33b
first isolates
2018-02-26 14:06:31 +01:00
d8da8daf9a
First CRAN submission edits
2018-02-22 20:48:48 +01:00
62304dc23f
first commit
2018-02-21 11:52:31 +01:00
