Commit Graph

7 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends 6f7730dcaa
add tests using testthat 2018-03-27 17:43:42 +02:00
dr. M.S. (Matthijs) Berends 53464ff1c8
- For functions `first_isolate`, `EUCAST_rules` the antibiotic column names are case-insensitive
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
dr. M.S. (Matthijs) Berends dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be `points` or `keyantibiotics, see `?first_isolate`
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
dr. M.S. (Matthijs) Berends 502a44eb25
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
2018-03-19 12:43:22 +01:00
dr. M.S. (Matthijs) Berends 34e70a65ed
added septic_patients 2018-02-27 20:01:02 +01:00
dr. M.S. (Matthijs) Berends d8da8daf9a
First CRAN submission edits 2018-02-22 20:48:48 +01:00
dr. M.S. (Matthijs) Berends 62304dc23f
first commit 2018-02-21 11:52:31 +01:00