dr. M.S. (Matthijs) Berends
7b0f1596bd
(v1.8.0.9010) as.mo improvement
2022-03-15 17:35:02 +01:00
dr. M.S. (Matthijs) Berends
0fb9a1b194
prerelease 1.8.1
2022-03-14 16:43:15 +01:00
dr. M.S. (Matthijs) Berends
45e9546538
prerelease 1.8.1
...
Merge branch 'development' of https://github.com/msberends/AMR into development
# Conflicts:
# docs/articles/AMR.html
# docs/articles/AMR_files/figure-html/disk_plots-1.png
# docs/articles/AMR_files/figure-html/disk_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots-1.png
# docs/articles/AMR_files/figure-html/mic_plots-2.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-2.png
# docs/articles/AMR_files/figure-html/plot 1-1.png
# docs/articles/AMR_files/figure-html/plot 3-1.png
# docs/articles/AMR_files/figure-html/plot 4-1.png
# docs/articles/AMR_files/figure-html/plot 5-1.png
# docs/articles/EUCAST.html
# docs/articles/MDR.html
# docs/articles/PCA.html
# docs/articles/PCA_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/PCA_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/SPSS.html
# docs/articles/WHONET.html
# docs/articles/WHONET_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/benchmarks.html
# docs/articles/benchmarks_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/datasets.html
# docs/articles/resistance_predict.html
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-2.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/welcome_to_AMR.html
# docs/news/index.html
# docs/pkgdown.yml
# docs/reference/AMR-deprecated.html
# docs/reference/AMR.html
# docs/reference/WHOCC.html
# docs/reference/WHONET.html
# docs/reference/antibiotics.html
# docs/reference/catalogue_of_life.html
# docs/reference/catalogue_of_life_version.html
# docs/reference/dosage.html
# docs/reference/example_isolates.html
# docs/reference/example_isolates_unclean.html
# docs/reference/g.test.html
# docs/reference/intrinsic_resistant.html
# docs/reference/microorganisms.codes.html
# docs/reference/microorganisms.html
# docs/reference/microorganisms.old.html
# docs/reference/rsi_translation.html
2022-03-14 16:37:37 +01:00
dr. M.S. (Matthijs) Berends
1b0983e382
(v1.8.1) prerelease 1.8.1
2022-03-14 16:36:10 +01:00
dr. M.S. (Matthijs) Berends
8c9feea087
website update
2022-03-12 19:53:29 +01:00
dr. M.S. (Matthijs) Berends
08d387b5ce
(v1.8.0.9005) as.rsi() fix
2022-03-10 19:33:25 +01:00
dr. M.S. (Matthijs) Berends
ad82bb4ce0
(v1.8.0.9004) MIC printing in tibbles
2022-03-03 21:11:02 +01:00
dr. M.S. (Matthijs) Berends
dedbe92322
(v1.8.0.9003) deps update
2022-03-02 23:16:37 +01:00
dr. M.S. (Matthijs) Berends
3b2b2be5f8
(v1.8.0.9002) as.rsi() cleanup, more informative warnings
2022-03-02 15:38:55 +01:00
dr. M.S. (Matthijs) Berends
18e8525d10
(v1.8.0.9001) as.mo improvement, fixes #52
2022-02-26 21:58:23 +01:00
dr. M.S. (Matthijs) Berends
be792cc9eb
(v1.8.0.9000) unit tests for R 3.3
2022-02-01 17:08:10 +01:00
dr. M.S. (Matthijs) Berends
f5dcf0ad58
v1.8.0 as accepted by CRAN
2022-01-07 16:27:13 +01:00
dr. M.S. (Matthijs) Berends
25cef46c59
(v1.8.0) prerelease 1.8.0
2021-12-23 18:56:28 +01:00
dr. M.S. (Matthijs) Berends
3f4ff260d2
unit test
2021-12-23 15:36:54 +01:00
dr. M.S. (Matthijs) Berends
75dac113b6
(v1.7.1.9077) skimr support only for newer R versions
2021-12-23 13:38:25 +01:00
dr. M.S. (Matthijs) Berends
ed22b83c28
fix macOS r-lib/actions unit test
2021-12-22 09:44:10 +01:00
dr. M.S. (Matthijs) Berends
d9274bcd0a
(v1.7.1.9075) assignment operator
2021-12-14 22:59:27 +01:00
dr. M.S. (Matthijs) Berends
76dee66852
(v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests
2021-12-14 22:39:23 +01:00
dr. M.S. (Matthijs) Berends
bd4bb1d72f
(v1.7.1.9073) as.rsi() fix for UTIs
2021-12-14 21:47:14 +01:00
dr. M.S. (Matthijs) Berends
5eef01165e
(v1.7.1.9072) as.rsi() fix for UTIs
2021-12-14 12:33:29 +01:00
dr. M.S. (Matthijs) Berends
0cbf8f48b6
(v1.7.1.9071) rsi disk fix
2021-12-13 11:57:34 +01:00
dr. M.S. (Matthijs) Berends
578e7dfee9
(v1.7.1.9070) Better WHONET support
2021-12-13 10:18:28 +01:00
dr. M.S. (Matthijs) Berends
f90e27c1b0
(v1.7.1.9069) CLSI 2021 support
2021-12-12 11:36:58 +01:00
dr. M.S. (Matthijs) Berends
1e66a3daf3
(v1.7.1.9068) new logo, unit tests
2021-12-12 11:07:02 +01:00
dr. M.S. (Matthijs) Berends
56f1ce328a
(v1.7.1.9067) Support for Swedish and Russian
2021-12-12 09:42:03 +01:00
dr. M.S. (Matthijs) Berends
5b5f70a103
(v1.7.1.9066) mdro EUCAST v3.3
2021-12-11 15:29:30 +01:00
dr. M.S. (Matthijs) Berends
e0a2634f14
(v1.7.1.9065) unit tests
2021-12-11 15:13:44 +01:00
dr. M.S. (Matthijs) Berends
77ba4318ea
(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
2021-12-11 13:41:31 +01:00
dr. M.S. (Matthijs) Berends
e18c49ed93
(v1.7.1.9063) not_intrinsic_resistant
2021-12-09 10:48:25 +01:00
dr. M.S. (Matthijs) Berends
e63defe324
(v1.7.1.9062) website update
2021-12-06 11:12:30 +01:00
dr. M.S. (Matthijs) Berends
1fa3fc6af2
(v1.7.1.9061) bugfix set_ab_names
2021-12-05 23:21:59 +01:00
dr. M.S. (Matthijs) Berends
75965124ef
(v1.7.1.9060) bugfix set_ab_names
2021-12-05 23:11:10 +01:00
dr. M.S. (Matthijs) Berends
b747036deb
(v1.7.1.9059) bugfix set_ab_names
2021-12-05 22:59:06 +01:00
dr. M.S. (Matthijs) Berends
7965468ccd
(v1.7.1.9058) vars selection for set_ab_names()
2021-12-05 22:06:45 +01:00
dr. M.S. (Matthijs) Berends
3abe61fd61
(v1.7.1.9057) NAs in get_episode()
2021-12-02 13:32:14 +01:00
dr. M.S. (Matthijs) Berends
5375f75829
(v1.7.1.9056) unit tests
2021-11-29 11:55:18 +01:00
dr. M.S. (Matthijs) Berends
c8698347cb
(v1.7.1.9055) added EUCAST 3.3 and all LPSN records numbers
2021-11-29 10:38:38 +01:00
dr. M.S. (Matthijs) Berends
694cf5ba77
(v1.7.1.9054) mdro() update - fixes #49 , first_isolate() speedup
2021-11-28 23:01:26 +01:00
dr. M.S. (Matthijs) Berends
9a2c431e16
(v1.7.1.9053) fortify() methods
2021-11-01 13:51:13 +01:00
dr. M.S. (Matthijs) Berends
91149d6d35
(v1.7.1.9052) eucast-update
2021-10-06 16:22:36 +02:00
dr. M.S. (Matthijs) Berends
37e6e35ec4
(v1.7.1.9051) updated taxonomy, updated git branch name
2021-10-06 13:23:57 +02:00
dr. M.S. (Matthijs) Berends
8f5e5a3fc2
(v1.7.1.9050) fix for as.mo
2021-10-05 14:00:35 +02:00
dr. M.S. (Matthijs) Berends
2bcf28281d
(v1.7.1.9049) unit tests
2021-10-05 09:58:08 +02:00
dr. M.S. (Matthijs) Berends
d1b16ce641
(v1.7.1.9048) unit tests
2021-10-04 10:22:10 +02:00
dr. M.S. (Matthijs) Berends
7a0ecd6c3b
No vignettes on old R unit tests
2021-10-03 23:49:46 +02:00
dr. M.S. (Matthijs) Berends
9b97233be2
(v1.7.1.9046) unit tests
2021-10-03 13:50:52 +02:00
dr. M.S. (Matthijs) Berends
b0c84cce9c
(v1.7.1.9045) unit tests
2021-09-29 20:24:02 +02:00
dr. M.S. (Matthijs) Berends
557ce74fd7
(v1.7.1.9044) unit tests
2021-09-29 20:13:52 +02:00
dr. M.S. (Matthijs) Berends
45f597cac5
(v1.7.1.9043) unit tests
2021-09-29 20:10:44 +02:00
dr. M.S. (Matthijs) Berends
0775802b7f
check file
2021-09-29 16:43:05 +02:00
