 dr. M.S. (Matthijs) Berends
|
fa2f5214b9
|
(v1.6.0.9060) unit tests
|
2021-05-22 10:05:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0b1f59edec
|
(v1.6.0.9058) unit tests
|
2021-05-22 08:58:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
65a8b58aa6
|
(v1.6.0.9056) support codecov again
|
2021-05-21 20:30:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b210f1327c
|
(v1.6.0.9055) support codecov again
|
2021-05-21 20:20:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
fecc5d183c
|
(v1.6.0.9054) unit tests
|
2021-05-20 15:06:08 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
69a656abc0
|
(v1.6.0.9053) unit tests
|
2021-05-20 13:42:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4a2a48b7c1
|
(v1.6.0.9052) unit tests
|
2021-05-20 11:42:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
04ef5b28e7
|
(v1.6.0.9050) printing NA in custom_eucast_rules()
|
2021-05-20 10:10:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9a2879cba9
|
(v1.6.0.9049) unit tests
|
2021-05-20 00:07:27 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2413efd5c1
|
(v1.6.0.9048) ab selectors overhaul
|
2021-05-19 22:55:42 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6920c0be41
|
(v1.6.0.9047) filter_ab_class() fixes
|
2021-05-18 11:29:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cfb7df823e
|
(v1.6.0.9044) betalactams() selector
|
2021-05-18 00:53:04 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
be49131ed7
|
(v1.6.0.9043) translation update
|
2021-05-17 19:43:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
83fec69a03
|
(v1.6.0.9042) translation update
|
2021-05-17 11:26:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
916df6e90c
|
(v1.6.0.9041) filter_ab_class() fix
|
2021-05-16 10:50:00 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
00496e45b7
|
(v1.6.0.9040) unit tests
|
2021-05-16 09:25:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d8c91d5876
|
(v1.6.0.9031) tinytest unit tests
|
2021-05-15 21:36:22 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9a381c8d18
|
(v1.6.0.9030) new unit test flow
|
2021-05-13 23:07:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9ed2f6490f
|
(v1.6.0.9028) new unit test flow
|
2021-05-13 22:44:11 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5b9fb8daf4
|
(v1.6.0.9027) new unit test flow
|
2021-05-13 21:54:15 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b1d942be91
|
(v1.6.0.9026) new unit test flow
|
2021-05-13 21:16:22 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
aeea00881e
|
(v1.6.0.9023) new unit test flow
|
2021-05-13 19:31:47 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
655b813e99
|
(v1.6.0.9022) unit test fix
|
2021-05-13 15:56:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
29dbfa2f49
|
(v1.6.0.9021) join functions update
|
2021-05-12 18:15:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3319fbae58
|
(v1.6.0.9020) fix for skimr in dplyr 1.0.6
|
2021-05-06 15:17:11 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5899678b74
|
(v1.6.0.9019) website fix
|
2021-05-05 15:47:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0aca719929
|
(v1.6.0.9018) unit tests
|
2021-05-04 15:20:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5679ccdaf9
|
(v1.6.0.9017) extra system codes
|
2021-05-04 12:47:33 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f33e61bac7
|
(v1.6.0.9016) website update and c() fixes
|
2021-05-03 13:06:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
12a8d59869
|
(v1.6.0.9015) italicise_taxonomy
|
2021-05-03 10:47:32 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e405de079c
|
(v1.6.0.9014) as.rsi() for numeric values
|
2021-04-30 13:18:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
a9fd4aa49f
|
(v1.6.0.9013) website update
|
2021-04-29 17:16:30 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5e06b20d43
|
(v1.6.0.9012) unit tests
|
2021-04-27 11:28:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c5fff1c95c
|
(v1.6.0.9011) unit tests
|
2021-04-27 10:27:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
93683a4ae2
|
(v1.6.0.9010) big first_isolate() update
|
2021-04-26 23:57:37 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5f9e7bd3ee
|
(v1.6.0.9009) key_antibiotics update
|
2021-04-23 16:13:26 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
70b803dbb6
|
(v1.6.0.9008) unlike, bugfix for col_mo naming
|
2021-04-23 09:59:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c6289c3fc3
|
(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
|
2021-04-20 10:46:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
de66eccf43
|
(v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi
|
2021-04-16 14:59:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
24ac18a99d
|
(v1.6.0.9005) unit test fix
|
2021-04-16 13:24:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9842ef9660
|
(v1.6.0.9004) unit test fix
|
2021-04-16 12:02:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
00d3e437a8
|
(v1.6.0.9003) like() fix
|
2021-04-16 11:41:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d277d58475
|
(v1.6.0.9002) R-3.0 installation fix
|
2021-04-12 14:24:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6ff5448192
|
(v1.6.0.9001) support Inf for episodes
|
2021-04-12 12:35:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7a3139f7cc
|
(v1.6.0.9000) custom EUCAST rules
|
2021-04-07 08:37:42 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
551f99dc8f
|
v1.6.0
|
2021-03-15 07:23:21 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8d6ceb6a15
|
(v1.5.0.9040) removal of isolate_identifier
|
2021-03-08 09:44:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
a7c9b4c295
|
(v1.5.0.9039) handle first isolates for missing antibiograms
|
2021-03-08 02:38:32 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
450bbe5fb7
|
(v1.5.0.9034) unit test fix
|
2021-03-07 21:16:45 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1bbf409fe5
|
(v1.5.0.9033) as.rsi fix
|
2021-03-07 16:15:43 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
850c123de7
|
(v1.5.0.9032) All group generics for MICs
|
2021-03-07 13:52:39 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
91dd755cac
|
(v1.5.0.9031) math processing of MICs
|
2021-03-05 15:36:39 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
0d29bde693
|
(v1.5.0.9030) as.ab() speed improvement
|
2021-03-05 10:32:09 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
0e0e3c4ffa
|
(v1.5.0.9029) added missing families and orders
|
2021-03-05 01:31:46 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ddf88345f1
|
(v1.5.0.9028) Updated taxonomy until March 2021
|
2021-03-04 23:28:32 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
41f94cde97
|
(v1.5.0.9027) website update
|
2021-02-26 12:11:29 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1737d56ae4
|
(v1.5.0.9026) vignette update, support for GISA
|
2021-02-25 12:31:12 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
a673407904
|
(v1.5.0.9025) big plot and ggplot generics update
|
2021-02-25 10:33:08 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
31ceba5441
|
(v1.5.0.9024) more speed improvements
|
2021-02-22 20:21:33 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
0fdabff1ba
|
(v1.5.0.9023) mo properties speed improvement
|
2021-02-21 23:19:40 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
062c49fca1
|
(v1.5.0.9022) mo properties speed improvement
|
2021-02-21 22:56:35 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
5ef8cb41a7
|
(v1.5.0.9021) improve speed of %like%
|
2021-02-21 20:15:09 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
daa12ced2c
|
(v1.5.0.9020) translation fix
|
2021-02-18 23:23:14 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
601ea7377c
|
(v1.5.0.9019) use functions without loading AMR pkg
|
2021-02-17 10:58:13 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
2dd0656355
|
(v1.5.0.9018) fix unit tests
|
2021-02-09 12:28:15 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8fda473e49
|
(v1.5.0.9015) unit test fix, grouped first isolates
|
2021-02-04 16:48:16 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
2eca8c3f01
|
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
|
2021-02-02 23:57:35 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
20d638c193
|
(v1.5.0.9013) updated tibble printing colours
|
2021-01-28 16:09:30 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
331c1f6508
|
(v1.5.0.9012) ampc_cephalosporin_resistance for I
|
2021-01-25 21:58:00 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
24eb4453db
|
(v1.5.0.9011) small dosage update
|
2021-01-24 23:27:11 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
286eaa9699
|
(v1.5.0.9010) MDRO vignette update, get_episode for < day
|
2021-01-24 14:48:56 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1a88caa119
|
(v1.5.0.9009) unit test fixes
|
2021-01-22 10:55:07 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1ba44776a1
|
(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
|
2021-01-22 10:20:41 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
27f084d819
|
(v1.5.0.9007) updated unit tests
|
2021-01-18 18:45:43 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
4eab095306
|
(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
e95218c0d1
|
(v1.5.0.9005) custom MDRO guideline
|
2021-01-17 10:35:21 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
e699de955c
|
(v1.5.0.9004) custom MDRO guideline
|
2021-01-17 00:26:48 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
7ebc534ccd
|
(v1.5.0.9003) verbose output of mdro()
|
2021-01-15 22:44:52 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
6745f3fb17
|
(v1.5.0.9002) doc update
|
2021-01-14 15:51:41 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
bc00470dca
|
(v1.5.0.9001) more informative argument errors
|
2021-01-14 14:41:44 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d014955ce0
|
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
|
2021-01-12 22:08:04 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
3b84b8be75
|
v1.5.0
|
2021-01-06 11:16:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1563dcd1aa
|
(v1.4.0.9062) unit test fix
|
2021-01-04 14:46:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
a7ea4c9d2f
|
(v1.4.0.9061) ab class selector fix
|
2021-01-04 14:16:09 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8d117820b8
|
(v1.4.0.9060) ab class selector fix
|
2021-01-04 13:39:06 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
c9de74c81a
|
(v1.4.0.9059) ab class selector fix
|
2021-01-04 12:29:25 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
82cfa24ea4
|
(v1.4.0.9058) GH actions update
|
2021-01-04 11:27:37 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
daac96fefe
|
(v1.4.0.9057) GH actions update
|
2021-01-04 09:49:42 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
63a4dda467
|
(v1.4.0.9056) subsetting ab class selectors for base R
|
2021-01-03 23:40:05 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ecac443f86
|
(v1.4.0.9055) more unit tests
|
2020-12-31 13:44:58 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
10dec96058
|
(v1.4.0.9054) unit test update
|
2020-12-29 22:06:01 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d3f007bf65
|
(v1.4.0.9053) unit test old R versions
|
2020-12-29 21:23:01 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
526f8afb08
|
(v1.4.0.9052) replaced all sapply's with type-safe vapply's
|
2020-12-28 22:24:33 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ccf13dd6c0
|
(v1.4.0.9051) ab class
|
2020-12-27 23:19:41 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
afc325c314
|
(v1.4.0.9050) ab selectors base R
|
2020-12-27 20:32:40 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
175e33abba
|
(v1.4.0.9049) unit tests
|
2020-12-27 15:07:01 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ed198916bf
|
(v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants
|
2020-12-27 14:23:11 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8b52f9b1be
|
(v1.4.0.9047) unit tests
|
2020-12-27 00:30:28 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
acbd0cf7ca
|
(v1.4.0.9046) get_episode
|
2020-12-27 00:07:00 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
291f802be3
|
(v1.4.0.9045) unit tests
|
2020-12-25 00:06:11 +01:00 |