 dr. M.S. (Matthijs) Berends
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4e1c16c5a5
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(v0.9.0.9019) website update
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2020-02-01 15:09:36 +01:00 |
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dr. M.S. (Matthijs) Berends
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f152ab9a48
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(v0.9.0.9018) Remove mo_history
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2020-01-31 23:27:38 +01:00 |
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dr. M.S. (Matthijs) Berends
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1b80773c22
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(v0.9.0.9017) documentation fix
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2020-01-27 19:30:26 +01:00 |
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dr. M.S. (Matthijs) Berends
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a13c62e6e8
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(v0.9.0.9016) Support SNOMED codes
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2020-01-27 19:14:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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42b079cdb7
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(v0.9.0.9015) Fix for as.rsi.disk()
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2020-01-27 11:37:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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9a3891efe4
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(v0.9.0.9014) Machine reading guidelines
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2020-01-27 11:05:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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423d1d3c41
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(v0.9.0.9013) Support for LOINC codes
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2020-01-26 20:38:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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449d9bde35
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(v0.9.0.9012) Support for LOINC codes
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2020-01-26 20:20:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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19172b1d48
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(v0.9.0.9011) Support R 4.0
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2020-01-15 16:40:34 +01:00 |
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dr. M.S. (Matthijs) Berends
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895e97c310
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(v0.9.0.9010) Support R 4.0
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2020-01-15 15:24:08 +01:00 |
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dr. M.S. (Matthijs) Berends
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64f5ceef03
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(v0.9.0.9009) antibiotics data set update
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2020-01-08 11:30:33 +01:00 |
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dr. M.S. (Matthijs) Berends
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ced1a7b7fa
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(v0.9.0.9008) Happy new year! Add lifecycles
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2020-01-05 17:22:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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f4669889e5
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(v0.9.0.9007) website update
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2019-12-27 11:56:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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db5dfff0ca
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(v0.9.0.9006) added CITATION file
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2019-12-22 11:43:38 +01:00 |
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dr. M.S. (Matthijs) Berends
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ba3ce77f02
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(v0.9.0.9005) as.mo for G. species
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2019-12-21 10:56:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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cc8cd043e1
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(v0.9.0.9004) website fix
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2019-12-20 21:06:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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2db2a2458a
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(v0.9.0.9003) as.mo() speedup for fullnames
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2019-12-20 15:05:58 +01:00 |
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dr. M.S. (Matthijs) Berends
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f7eb6e4107
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(v0.9.0.9002) website updates
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2019-12-16 11:08:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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a7e538e562
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(v0.9.0) website fixes
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2019-11-30 13:31:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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56ce9bf665
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(v0.9.0) website fixes
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2019-11-30 12:01:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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bb2ed55842
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(v0.9.0) v0.9.0
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2019-11-29 19:43:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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9feef53bde
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(v0.8.0.9037) complete documentation rewrite
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2019-11-28 23:00:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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c5f00f4a9f
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(v0.8.0.9036) complete documentation rewrite
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2019-11-28 22:32:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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7c28b392b1
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(v0.8.0.9035) add more mo codes
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2019-11-24 22:48:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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e53cc4990c
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(v0.8.0.9034) add cid to antivirals
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2019-11-23 12:39:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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267320f15f
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(v0.8.0.9033) antivirals data set, cleanup
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2019-11-18 12:10:47 +01:00 |
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dr. M.S. (Matthijs) Berends
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67f3f4387b
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(v0.8.0.9032) fix regex error
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2019-11-15 16:50:46 +01:00 |
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dr. M.S. (Matthijs) Berends
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09e2730b53
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(v0.8.0.9031) as.mo() improvements
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2019-11-15 15:25:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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248b45da71
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(v0.8.0.9030) depend on tidyr >= 1.0.0
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2019-11-11 10:46:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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d22834c5b8
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(v0.8.0.9029) cleanup
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2019-11-10 15:50:18 +01:00 |
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dr. M.S. (Matthijs) Berends
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54b6322056
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(v0.8.0.9028) examples fix
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2019-11-10 13:17:20 +01:00 |
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dr. M.S. (Matthijs) Berends
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59ededa8dc
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(v0.8.0.9027) adding susceptibility() and resistance()
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2019-11-10 12:16:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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228a4245cb
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(v0.8.0.9026) appveyor fix
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2019-11-10 09:26:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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a8c48cb2d7
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(v0.8.0.9025) appveyor fix
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2019-11-10 09:21:43 +01:00 |
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dr. M.S. (Matthijs) Berends
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07f945de53
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(v0.8.0.9024) appveyor fix
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2019-11-10 09:04:18 +01:00 |
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dr. M.S. (Matthijs) Berends
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e252f68cdb
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(v0.8.0.9023) appveyor fix
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2019-11-09 17:13:31 +01:00 |
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dr. M.S. (Matthijs) Berends
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32e3a98967
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(v0.8.0.9022) update vignettes
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2019-11-09 16:37:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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ef640add2d
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(v0.8.0.9021) update vignettes
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2019-11-09 11:33:22 +01:00 |
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dr. M.S. (Matthijs) Berends
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e2d05cb1b0
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(v0.8.0.9017) keywords update
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2019-11-06 14:43:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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be9a3e6b12
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(v0.8.0.9016) unit test update
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2019-11-05 23:07:05 +01:00 |
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dr. M.S. (Matthijs) Berends
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d19c44a25f
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(v0.8.0.9015) unit test update
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2019-11-05 22:42:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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a1fd2cd98a
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(v0.8.0.9014) unit test update
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2019-11-05 22:23:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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2560aa1a53
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(v0.8.0.9013) unit test update
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2019-11-05 21:52:58 +01:00 |
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dr. M.S. (Matthijs) Berends
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5345d2759a
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(v0.8.0.9012) mdro improvement
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2019-11-05 11:28:52 +01:00 |
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dr. M.S. (Matthijs) Berends
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fe606e287b
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(v0.8.0.9011) col guess update
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2019-11-04 12:08:08 +01:00 |
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dr. M.S. (Matthijs) Berends
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9060233953
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(v0.8.0.9010) mdro bug fix
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2019-11-04 11:35:34 +01:00 |
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dr. M.S. (Matthijs) Berends
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0bb531f3e0
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(v0.8.0.9009) unit test
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2019-11-03 22:41:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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29e448883d
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(v0.8.0.9008) new verbose mode for MDROs
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2019-11-03 22:24:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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09c4b04cd0
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(v0.8.0.9007) Enterobacterales order
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2019-10-30 23:02:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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7ff2ad8188
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(v0.8.0.9006) small typos
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2019-10-27 00:31:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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412077a6f2
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(v0.8.0.9005) fix unit tests
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2019-10-26 22:21:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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d2e8249edd
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(v0.8.0.9004) added MDR guideline by Magiorakos et al.
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2019-10-26 21:56:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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c01dc8a5b7
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(v0.8.0.9003) printing fix for AB columns
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2019-10-23 15:44:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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3e5ab53209
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(v0.8.0.9002) eucast_rules() fix for S. maltophilia
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2019-10-23 14:48:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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666126cd5e
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(v0.8.0.9001) guideline text on as.rsi()
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2019-10-21 14:12:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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1b8e2366f7
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(v0.8.0.9000) website update
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2019-10-16 22:47:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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10e6b225e7
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(v0.7.1.9107) v0.8.0
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2019-10-15 14:35:23 +02:00 |
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dr. M.S. (Matthijs) Berends
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2c0f3534bf
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(v0.7.1.9106) v0.8.0
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2019-10-13 09:31:58 +02:00 |
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dr. M.S. (Matthijs) Berends
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1736fb62d6
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(v0.7.1.9105) another try
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2019-10-12 10:08:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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2eb4a42f3d
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(v0.7.1.9104) vignette fix
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2019-10-12 09:15:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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b2a08d056b
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(v0.7.1.9103) add lintr to CI
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2019-10-11 19:16:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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00cdb498a0
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(v0.7.1.9102) lintr
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2019-10-11 17:21:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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c8f6b97847
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(v0.7.1.9100) bug_drug speed, MIC levels
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2019-10-08 22:21:33 +02:00 |
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dr. M.S. (Matthijs) Berends
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5dbff3e170
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(v0.7.1.9098) mdro() unit test fix
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2019-10-07 15:12:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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f479dfce60
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(v0.7.1.9097) mdro() examples fix
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2019-10-07 14:57:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e9c4c1b4e
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(v0.7.1.9096) German guideline for mdro()
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2019-10-07 14:32:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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1e260d85c8
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(v0.7.1.9095) get_column_abx() fix
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2019-10-06 22:19:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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3d5692219e
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(v0.7.1.9094) get_column_abx() improvement
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2019-10-06 21:44:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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b6653a620a
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(v0.7.1.9093) as.ab() fix
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2019-10-06 21:07:38 +02:00 |
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dr. M.S. (Matthijs) Berends
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8bc4081b03
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(v0.7.1.9092) as.ab() improvements
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2019-10-04 15:36:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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edb599ae0b
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(v0.7.1.9091) percentage from clean pkg
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2019-09-30 16:45:36 +02:00 |
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dr. M.S. (Matthijs) Berends
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b39e7feae6
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(v0.7.1.9090) factor levels of mdr_tb
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2019-09-26 21:58:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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b9f01d686e
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(v0.7.1.9089) eucast file update
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2019-09-25 22:37:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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99d0fe76dd
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(v0.7.1.9088) bug_drug improvement
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2019-09-25 15:43:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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04cd0d25db
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(v0.7.1.9087) small fix
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2019-09-23 23:09:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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38336d7408
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(v0.7.1.9086) small fix
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2019-09-23 23:00:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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ad5f211a8f
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(v0.7.1.9085) Salmonella fix
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2019-09-23 21:24:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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76dc948067
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(v0.7.1.9084) CI fix
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2019-09-23 20:55:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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8ce252fbc5
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(v0.7.1.9083) LIS code improvement
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2019-09-23 17:32:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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a8c6b8f9c4
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(v0.7.1.9082) CI fix
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2019-09-23 14:37:24 +02:00 |
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dr. M.S. (Matthijs) Berends
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64d9829030
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(v0.7.1.9081) bug_drug fixes
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2019-09-23 13:53:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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66d405ff57
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(v0.7.1.9080) new LIS codes
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2019-09-22 17:19:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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57b0bd92a0
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(v0.7.1.9079) small fixes
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2019-09-22 12:41:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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46b61e9a70
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(v0.7.1.9078) unit tests
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2019-09-20 14:50:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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40e6b3e8f6
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(v0.7.1.9077) mo codes fix
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2019-09-20 14:18:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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3596adb295
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(v0.7.1.9076) mo codes
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2019-09-20 12:33:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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e2aa4f996b
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(v0.7.1.9075) new microorganism codes
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2019-09-18 15:46:09 +02:00 |
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dr. M.S. (Matthijs) Berends
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f553a08a7b
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(v0.7.1.9074) CI updates
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2019-09-16 12:00:56 +02:00 |
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dr. M.S. (Matthijs) Berends
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398c5bdc4f
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(v0.7.1.9073) as.mo() self-learning algorithm
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2019-09-15 22:57:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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cd178ee569
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(v0.7.1.9072) key_antibiotics() for foreign systems
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2019-09-12 15:08:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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b5d2a08401
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(v0.7.1.9071) p_symbol()
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2019-09-03 09:47:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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06b6266366
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(v0.7.1.9070) na.rm for age(), age_groups()
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2019-09-02 15:17:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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c7be72f0ce
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(v0.7.1.9069) documentation update
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2019-09-01 13:16:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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88ee1b7268
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(v0.7.1.9068) gramstain to freq()
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2019-08-30 14:50:56 +02:00 |
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dr. M.S. (Matthijs) Berends
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34a82d091e
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(v0.7.1.9067) honor info
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2019-08-28 17:12:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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e2b78fa428
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(v0.7.1.9066) bug-drug fix
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2019-08-27 23:00:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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248638ad91
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(v0.7.1.9065) bug-drug fix
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2019-08-27 22:41:09 +02:00 |
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dr. M.S. (Matthijs) Berends
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f3276592b7
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(v0.7.1.9064) bug-drug fix
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2019-08-27 19:15:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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93be16484b
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(v0.7.1.9063) septic_patients -> example_isolates
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2019-08-27 16:45:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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7a6fce4eb8
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(v0.7.1.9062) mo/ab assignment improvements
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2019-08-26 16:02:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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13d4fef801
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(v0.7.1.9061) mo_property improvement
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2019-08-26 10:03:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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e46cb0399f
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(v0.7.1.9059) bug_drug_combinations
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2019-08-25 22:53:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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7c069145ac
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(v0.7.1.9058) as.mo() improvement
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2019-08-20 11:40:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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04d49a62af
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(v0.7.1.9057) get_column_abx() improvement
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2019-08-15 17:09:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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920212e815
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(v0.7.1.9056) mo and ab subsetting
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2019-08-14 14:57:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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7108454ba5
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(v0.7.1.9055) algorithm improvements
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2019-08-13 16:15:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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5f2733349e
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(v0.7.1.9038) mo algorithm inprovements
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2019-08-12 19:07:15 +02:00 |
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dr. M.S. (Matthijs) Berends
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c44c5e3913
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(v0.7.1.9037) CI and global env fix
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2019-08-12 15:34:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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bd252a2984
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(v0.7.1.9036) preserve ab/mo classes in subsetting
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2019-08-12 14:48:09 +02:00 |
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dr. M.S. (Matthijs) Berends
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1d423cca89
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(v0.7.1.9035) cephalosporins and unit tests
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2019-08-11 19:07:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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3f5828e74a
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(v0.7.1.9034) mo.codes fix for Dracunculus spp.
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2019-08-09 23:45:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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6598c5615d
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(v0.7.1.9033) 5000 new fungi
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2019-08-09 23:22:10 +02:00 |
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dr. M.S. (Matthijs) Berends
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6a349bf757
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(v0.7.1.9032) eucast_rules() improvements
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2019-08-09 14:28:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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1ce4b72dd2
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(v0.7.1.9031) include_unknown for first_isolate()
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2019-08-08 22:39:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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22a206ffd8
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(v0.7.1.9030) eucast_rules() fix
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2019-08-08 15:52:07 +02:00 |
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dr. M.S. (Matthijs) Berends
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f67c739892
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(v0.7.1.9029) unit test
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2019-08-07 18:56:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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bfa92eb166
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(v0.7.1.9028) predict update
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2019-08-07 15:58:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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90c874025a
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(v0.7.1.9027) tibble printing
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2019-08-07 15:37:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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14c47da656
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(v0.7.1.9026) NAMESPACE fix
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2019-08-06 15:57:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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3a1f960f89
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(v0.7.1.9024) eucast_rules() fix, new MOs
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2019-08-06 14:39:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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85b62aaf8f
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(v0.7.1.9023) wrong percentage in as.mo()
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2019-08-04 17:41:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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643c5ed807
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(v0.7.1.9022) CI fix for codecov
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2019-08-04 11:33:56 +02:00 |
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dr. M.S. (Matthijs) Berends
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d6ab3896a1
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(v0.7.1.9021) CI fix for resistance_predict
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2019-08-04 10:48:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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4f3ef53c78
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(v0.7.1.9020) CI fix 2
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2019-08-03 21:51:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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a6606d334c
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(v0.7.1.9019) CI fix
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2019-07-30 19:20:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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2a62c3d62a
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(v0.7.1.9018) deps
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2019-07-30 13:12:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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ec0ca20dee
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(v0.7.1.9017) deps
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2019-07-29 21:20:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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b7e2d7b9b8
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(v0.7.1.9016) deps
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2019-07-29 17:34:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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240f03a672
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(v0.7.1.9015) Remove freq()
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2019-07-29 13:33:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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9ac5a34b36
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(v0.7.1.9014) MO codes update
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2019-07-16 16:14:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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c652c6913f
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(v0.7.1.9013) guess_mo_ab speed improvement
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2019-07-11 13:39:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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68230d0712
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(v0.7.1.90012) mo_shortname fix
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2019-07-10 21:36:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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b452de2fe4
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(v0.7.1.9010) eucast informative text in verbose mode
|
2019-07-09 13:36:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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b15d59cf03
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(v0.7.1.9009) note for WHOCC
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2019-07-09 11:22:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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d9e257f8db
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(v0.7.1.9008) ab update
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2019-07-04 19:08:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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c57ad26c5b
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(v0.7.1.9007) mdro update
|
2019-07-04 15:26:07 +02:00 |
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dr. M.S. (Matthijs) Berends
|
4ff20af123
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(v0.7.1.9006) new rsi calculations, atc class removal
|
2019-07-02 16:48:52 +02:00 |
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dr. M.S. (Matthijs) Berends
|
156d550895
|
(v0.7.1.9005) new rsi calculations, atc class removal
|
2019-07-01 14:03:15 +02:00 |
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dr. M.S. (Matthijs) Berends
|
65c6702b21
|
(v0.7.1.9004) atc class removal
|
2019-06-27 11:57:45 +02:00 |
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dr. M.S. (Matthijs) Berends
|
6013fbefae
|
(v0.7.1.9003) website update
|
2019-06-23 21:35:17 +02:00 |
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dr. M.S. (Matthijs) Berends
|
f2d7a19118
|
(v0.7.1.9002) website update
|
2019-06-23 17:44:36 +02:00 |
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dr. M.S. (Matthijs) Berends
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278244140c
|
(v0.7.0.9015) vignette fix
|
2019-06-22 21:33:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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b94638d53e
|
(v0.7.0.9014) unit tests
|
2019-06-22 20:14:06 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c9156c004a
|
(v0.7.0.9013) mo_synonym fix
|
2019-06-22 14:49:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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409397a337
|
(v0.7.0.9012) unit test
|
2019-06-18 19:28:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
9c39c35f86
|
(v0.7.0.9010) mo_synonyms, plot/barplot fixes
|
2019-06-16 21:42:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
980be2b22d
|
(v0.7.0.9009) global note
|
2019-06-13 16:40:35 +02:00 |
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dr. M.S. (Matthijs) Berends
|
254745061c
|
(v0.7.0.9008) T. vaginalis, rsi_df
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2019-06-13 14:28:46 +02:00 |
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dr. M.S. (Matthijs) Berends
|
699e87ab4a
|
(v0.7.0.9007) renamed notes fix
|
2019-06-12 16:08:20 +02:00 |
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dr. M.S. (Matthijs) Berends
|
44ab53128e
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(v0.7.0.9006) ab algorithm fix for ATC codes
|
2019-06-11 15:31:32 +02:00 |