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b228eb1536
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(v1.7.1.9016) only_treatable ab selectors
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2021-07-08 22:23:28 +02:00 |
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625a6fb304
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(v1.7.1.9015) removed S3 taxonomic_name again
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2021-07-07 20:34:05 +02:00 |
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ad10693a1a
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(v1.7.1.9014) rep() for S3 classes
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2021-07-06 16:35:14 +02:00 |
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16b4c74d44
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(v1.7.1.9013) temp fix for ggplot2 bug #4511
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2021-07-04 22:10:46 +02:00 |
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5b5741f681
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(v1.7.1.9011) subsetting taxonomy fix
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2021-07-04 15:26:50 +02:00 |
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3bd50710e8
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(v1.7.1.9010) fix for count_* and proportion_*
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2021-07-04 12:00:41 +02:00 |
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3e26929838
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(v1.7.1.9009) fix for ab class selectors
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2021-07-03 21:56:53 +02:00 |
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95050ee3e0
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(v1.7.1.9007) Updated antibiotics dataset, fixes #41
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2021-06-23 10:03:17 +02:00 |
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d04e83f494
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(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
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2021-06-22 12:16:42 +02:00 |
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c44d9392ca
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(v1.7.1.9004) more extensive unit tests
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2021-06-15 10:51:04 +02:00 |
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556bf0014d
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(v1.7.1.9003) unit test
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2021-06-14 22:37:05 +02:00 |
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99be4c7e7e
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(v1.7.1.9002) ab class selectors update
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2021-06-14 22:04:04 +02:00 |
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683a0e748a
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(v1.7.1.9001) unit tests
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2021-06-05 15:12:01 +02:00 |
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1908e7cc7a
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(v1.7.1.9000) ab_class update, unit tests
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2021-06-04 21:07:55 +02:00 |
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7e70403efb
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(v1.7.1) New CRAN release
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2021-06-03 15:19:21 +02:00 |
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bef0f42f66
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(v1.7.0.9001) CLSI 2020 guideline
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2021-06-01 15:33:06 +02:00 |
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f406319503
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(v1.7.0.9000) package size
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2021-05-30 22:14:38 +02:00 |
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a33c8a51a2
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v1.7.0
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2021-05-26 10:59:54 +02:00 |
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ac73a8d849
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v1.7.0
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2021-05-24 15:29:17 +02:00 |
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e5599bc694
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(v1.6.0.9065) unit tests
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2021-05-24 11:01:32 +02:00 |
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4fbf9e1720
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(v1.6.0.9064) prepare new release
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2021-05-24 09:34:08 +02:00 |
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a13fd98e8b
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(v1.6.0.9063) prepare new release
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2021-05-24 09:00:11 +02:00 |
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06302d296a
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(v1.6.0.9062) code consistency
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2021-05-24 00:06:28 +02:00 |
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07939b1a14
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(v1.6.0.9061) age() update
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2021-05-23 23:11:16 +02:00 |
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b210f1327c
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(v1.6.0.9055) support codecov again
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2021-05-21 20:20:51 +02:00 |
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4a2a48b7c1
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(v1.6.0.9052) unit tests
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2021-05-20 11:42:39 +02:00 |
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04ef5b28e7
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(v1.6.0.9050) printing NA in custom_eucast_rules()
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2021-05-20 10:10:40 +02:00 |
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9a2879cba9
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(v1.6.0.9049) unit tests
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2021-05-20 00:07:27 +02:00 |
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2413efd5c1
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(v1.6.0.9048) ab selectors overhaul
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2021-05-19 22:55:42 +02:00 |
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6920c0be41
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(v1.6.0.9047) filter_ab_class() fixes
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2021-05-18 11:29:31 +02:00 |
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cfb7df823e
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(v1.6.0.9044) betalactams() selector
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2021-05-18 00:53:04 +02:00 |
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be49131ed7
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(v1.6.0.9043) translation update
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2021-05-17 19:43:01 +02:00 |
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83fec69a03
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(v1.6.0.9042) translation update
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2021-05-17 11:26:12 +02:00 |
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916df6e90c
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(v1.6.0.9041) filter_ab_class() fix
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2021-05-16 10:50:00 +02:00 |
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aeea00881e
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(v1.6.0.9023) new unit test flow
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2021-05-13 19:31:47 +02:00 |
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655b813e99
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(v1.6.0.9022) unit test fix
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2021-05-13 15:56:12 +02:00 |
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29dbfa2f49
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(v1.6.0.9021) join functions update
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2021-05-12 18:15:03 +02:00 |
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3319fbae58
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(v1.6.0.9020) fix for skimr in dplyr 1.0.6
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2021-05-06 15:17:11 +02:00 |
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0aca719929
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(v1.6.0.9018) unit tests
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2021-05-04 15:20:43 +02:00 |
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5679ccdaf9
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(v1.6.0.9017) extra system codes
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2021-05-04 12:47:33 +02:00 |
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f33e61bac7
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(v1.6.0.9016) website update and c() fixes
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2021-05-03 13:06:43 +02:00 |
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12a8d59869
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(v1.6.0.9015) italicise_taxonomy
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2021-05-03 10:47:32 +02:00 |
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e405de079c
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(v1.6.0.9014) as.rsi() for numeric values
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2021-04-30 13:18:48 +02:00 |
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a9fd4aa49f
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(v1.6.0.9013) website update
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2021-04-29 17:16:30 +02:00 |
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5e06b20d43
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(v1.6.0.9012) unit tests
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2021-04-27 11:28:17 +02:00 |
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c5fff1c95c
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(v1.6.0.9011) unit tests
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2021-04-27 10:27:13 +02:00 |
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93683a4ae2
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(v1.6.0.9010) big first_isolate() update
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2021-04-26 23:57:37 +02:00 |
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5f9e7bd3ee
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(v1.6.0.9009) key_antibiotics update
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2021-04-23 16:13:26 +02:00 |
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70b803dbb6
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(v1.6.0.9008) unlike, bugfix for col_mo naming
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2021-04-23 09:59:36 +02:00 |
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c6289c3fc3
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(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
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2021-04-20 10:46:17 +02:00 |
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de66eccf43
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(v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi
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2021-04-16 14:59:57 +02:00 |
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24ac18a99d
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(v1.6.0.9005) unit test fix
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2021-04-16 13:24:59 +02:00 |
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9842ef9660
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(v1.6.0.9004) unit test fix
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2021-04-16 12:02:57 +02:00 |
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00d3e437a8
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(v1.6.0.9003) like() fix
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2021-04-16 11:41:05 +02:00 |
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d277d58475
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(v1.6.0.9002) R-3.0 installation fix
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2021-04-12 14:24:40 +02:00 |
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6ff5448192
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(v1.6.0.9001) support Inf for episodes
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2021-04-12 12:35:13 +02:00 |
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7a3139f7cc
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(v1.6.0.9000) custom EUCAST rules
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2021-04-07 08:37:42 +02:00 |
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551f99dc8f
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v1.6.0
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2021-03-15 07:23:21 +01:00 |
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4e0a9533ad
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(v1.5.0.9041) SNOMED update
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2021-03-11 21:42:30 +01:00 |
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8d6ceb6a15
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(v1.5.0.9040) removal of isolate_identifier
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2021-03-08 09:44:17 +01:00 |
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a7c9b4c295
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(v1.5.0.9039) handle first isolates for missing antibiograms
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2021-03-08 02:38:32 +01:00 |
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461793dc34
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(v1.5.0.9038) quick test
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2021-03-08 01:24:37 +01:00 |
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a12975bc6e
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(v1.5.0.9037) quick test
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2021-03-08 00:13:13 +01:00 |
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68163e3089
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(v1.5.0.9036) quick test
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2021-03-07 22:45:05 +01:00 |
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2f0fc3cab7
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(v1.5.0.9035) quick test
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2021-03-07 22:15:25 +01:00 |
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450bbe5fb7
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(v1.5.0.9034) unit test fix
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2021-03-07 21:16:45 +01:00 |
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1bbf409fe5
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(v1.5.0.9033) as.rsi fix
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2021-03-07 16:15:43 +01:00 |
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850c123de7
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(v1.5.0.9032) All group generics for MICs
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2021-03-07 13:52:39 +01:00 |
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91dd755cac
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(v1.5.0.9031) math processing of MICs
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2021-03-05 15:36:39 +01:00 |
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0d29bde693
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(v1.5.0.9030) as.ab() speed improvement
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2021-03-05 10:32:09 +01:00 |
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0e0e3c4ffa
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(v1.5.0.9029) added missing families and orders
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2021-03-05 01:31:46 +01:00 |
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ddf88345f1
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(v1.5.0.9028) Updated taxonomy until March 2021
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2021-03-04 23:28:32 +01:00 |
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41f94cde97
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(v1.5.0.9027) website update
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2021-02-26 12:11:29 +01:00 |
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1737d56ae4
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(v1.5.0.9026) vignette update, support for GISA
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2021-02-25 12:31:12 +01:00 |
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a673407904
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(v1.5.0.9025) big plot and ggplot generics update
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2021-02-25 10:33:08 +01:00 |
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31ceba5441
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(v1.5.0.9024) more speed improvements
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2021-02-22 20:21:33 +01:00 |
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0fdabff1ba
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(v1.5.0.9023) mo properties speed improvement
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2021-02-21 23:19:40 +01:00 |
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062c49fca1
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(v1.5.0.9022) mo properties speed improvement
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2021-02-21 22:56:35 +01:00 |
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5ef8cb41a7
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(v1.5.0.9021) improve speed of %like%
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2021-02-21 20:15:09 +01:00 |
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daa12ced2c
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(v1.5.0.9020) translation fix
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2021-02-18 23:23:14 +01:00 |
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
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2021-02-17 10:58:13 +01:00 |
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2dd0656355
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(v1.5.0.9018) fix unit tests
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2021-02-09 12:28:15 +01:00 |
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cb404492b2
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(v1.5.0.9017) unit testing
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2021-02-08 21:09:36 +01:00 |
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4a84894f79
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(v1.5.0.9016) only_rsi_columns update, documentation
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2021-02-08 14:18:42 +01:00 |
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8fda473e49
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(v1.5.0.9015) unit test fix, grouped first isolates
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2021-02-04 16:48:16 +01:00 |
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
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2021-02-02 23:57:35 +01:00 |
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20d638c193
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(v1.5.0.9013) updated tibble printing colours
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2021-01-28 16:09:30 +01:00 |
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331c1f6508
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(v1.5.0.9012) ampc_cephalosporin_resistance for I
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2021-01-25 21:58:00 +01:00 |
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24eb4453db
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(v1.5.0.9011) small dosage update
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2021-01-24 23:27:11 +01:00 |
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286eaa9699
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(v1.5.0.9010) MDRO vignette update, get_episode for < day
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2021-01-24 14:48:56 +01:00 |
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1a88caa119
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(v1.5.0.9009) unit test fixes
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2021-01-22 10:55:07 +01:00 |
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1ba44776a1
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(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
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2021-01-22 10:20:41 +01:00 |
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27f084d819
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(v1.5.0.9007) updated unit tests
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2021-01-18 18:45:43 +01:00 |
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4eab095306
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(v1.5.0.9006) major documentation update
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2021-01-18 16:57:56 +01:00 |
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e95218c0d1
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(v1.5.0.9005) custom MDRO guideline
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2021-01-17 10:35:21 +01:00 |
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e699de955c
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(v1.5.0.9004) custom MDRO guideline
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2021-01-17 00:26:48 +01:00 |
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7ebc534ccd
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(v1.5.0.9003) verbose output of mdro()
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2021-01-15 22:44:52 +01:00 |
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6745f3fb17
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(v1.5.0.9002) doc update
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2021-01-14 15:51:41 +01:00 |
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bc00470dca
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(v1.5.0.9001) more informative argument errors
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2021-01-14 14:41:44 +01:00 |
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d014955ce0
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
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2021-01-12 22:08:04 +01:00 |
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3b84b8be75
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v1.5.0
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2021-01-06 11:16:17 +01:00 |
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8d117820b8
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(v1.4.0.9060) ab class selector fix
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2021-01-04 13:39:06 +01:00 |
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c9de74c81a
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(v1.4.0.9059) ab class selector fix
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2021-01-04 12:29:25 +01:00 |
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63a4dda467
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(v1.4.0.9056) subsetting ab class selectors for base R
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2021-01-03 23:40:05 +01:00 |
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d3f007bf65
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(v1.4.0.9053) unit test old R versions
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2020-12-29 21:23:01 +01:00 |
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526f8afb08
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(v1.4.0.9052) replaced all sapply's with type-safe vapply's
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2020-12-28 22:24:33 +01:00 |
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ccf13dd6c0
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(v1.4.0.9051) ab class
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2020-12-27 23:19:41 +01:00 |
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afc325c314
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(v1.4.0.9050) ab selectors base R
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2020-12-27 20:32:40 +01:00 |
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175e33abba
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(v1.4.0.9049) unit tests
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2020-12-27 15:07:01 +01:00 |
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ed198916bf
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(v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants
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2020-12-27 14:23:11 +01:00 |
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8b52f9b1be
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(v1.4.0.9047) unit tests
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2020-12-27 00:30:28 +01:00 |
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acbd0cf7ca
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(v1.4.0.9046) get_episode
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2020-12-27 00:07:00 +01:00 |
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291f802be3
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(v1.4.0.9045) unit tests
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2020-12-25 00:06:11 +01:00 |
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df37584189
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(v1.4.0.9044) mo tibble printing, mo_shortname() fix
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2020-12-24 23:29:10 +01:00 |
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128ebcfd62
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(v1.4.0.9043) documentation update
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2020-12-22 00:51:17 +01:00 |
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ee70883246
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(v1.4.0.9042) auto dark theme website
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2020-12-21 22:46:29 +01:00 |
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81af41da3a
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(v1.4.0.9041) updates based on review
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2020-12-17 16:22:25 +01:00 |
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1faa816090
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(v1.4.0.9040) LA-MRSA / CA-MRSA
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2020-12-16 16:18:53 +01:00 |
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203bc20eb0
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(v1.4.0.9039) more unit tests
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2020-12-13 20:44:32 +01:00 |
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ac22b8d5c1
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(v1.4.0.9038) docu update
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2020-12-13 13:44:04 +01:00 |
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c8bcecf232
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(v1.4.0.9037) random_* functions
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2020-12-12 23:17:29 +01:00 |
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2edd3339db
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(v1.4.0.9036) more unit tests
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2020-12-11 12:17:23 +01:00 |
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23ddc6004b
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(v1.4.0.9035) eucast_rules fix
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2020-12-11 09:05:03 +01:00 |
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c9fc7e8a45
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(v1.4.0.9034) MIC printing update
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2020-12-09 09:40:50 +01:00 |
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2145f1d1ba
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(v1.4.0.9033) documentation update
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2020-12-08 12:37:25 +01:00 |
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1bdb136b3a
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(v1.4.0.9032) auto-data guessing for functions
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2020-12-07 16:06:42 +01:00 |
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fdf29e6c5b
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(v1.4.0.9031) as.ab() fix
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2020-12-03 22:30:14 +01:00 |
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e03b3c96d3
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(v1.4.0.9030) as.mo() fix for known lab codes
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2020-12-03 16:59:04 +01:00 |
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4c114ff4b4
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(v1.4.0.9029) grey background for backticks, like readr pkg
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2020-12-01 16:59:57 +01:00 |
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00447c6dc4
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git update
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2020-11-28 22:15:44 +01:00 |
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7b42b15c90
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(v1.4.0.9026) docu update
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2020-11-24 11:47:54 +01:00 |
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b045b571a6
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(v1.4.0.9025) is_new_episode()
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2020-11-23 21:50:27 +01:00 |
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363218da7e
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(v1.4.0.9024) is_new_episode()
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2020-11-17 16:57:41 +01:00 |
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93428415d0
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(v1.4.0.9022) small bugfix
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2020-11-16 20:02:20 +01:00 |
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deefce9520
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(v1.4.0.9021) more robust class setting
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2020-11-16 16:57:55 +01:00 |
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05fb213a7c
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(v1.4.0.9020) mo_is_intrinsic_resistant
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2020-11-16 11:03:24 +01:00 |
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9666b78ea7
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(v1.4.0.9019) documentation update
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2020-11-12 11:07:23 +01:00 |
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f2edac3b67
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(v1.4.0.9018) reference_data in as.rsi()
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2020-11-11 18:54:03 +01:00 |
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01d9522434
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(v1.4.0.9017) stringsAsFactors definitions
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2020-11-11 16:49:27 +01:00 |
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68ac39aa7f
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(v1.4.0.9016) as.rsi() older R versions
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2020-11-10 19:59:14 +01:00 |
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15c732703d
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(v1.4.0.9015) bugfix
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2020-11-10 16:35:56 +01:00 |
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dd5a0319ef
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(v1.4.0.9014) bugfix
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2020-11-09 15:18:36 +01:00 |
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d3b1d33210
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(v1.4.0.9013) is_gram_negative/positive update
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2020-11-09 13:07:02 +01:00 |
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423879c034
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(v1.4.0.9012) reference_df fix
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2020-11-05 01:11:49 +01:00 |
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5a607abb36
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(v1.4.0.9011) message formatting
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2020-10-27 15:56:51 +01:00 |
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3d096d96c2
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(v1.4.0.9009) bugfix for older R version
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2020-10-26 15:53:31 +01:00 |
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760d69a3e0
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(v1.4.0.9008) like variations
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2020-10-26 12:23:03 +01:00 |
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f720c9ba0b
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(v1.4.0.9007) bugfix
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2020-10-21 15:28:48 +02:00 |
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8f868388ce
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(v1.4.0.9006) bugfix
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2020-10-21 14:40:00 +02:00 |
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9109b9dd62
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(v1.4.0.9005) bugfix
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2020-10-21 13:07:23 +02:00 |
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ade9f8bafd
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(v1.4.0.9004) bugfix
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2020-10-21 11:50:43 +02:00 |
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2ef7dfc8a3
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(v1.4.0.9003) CoNS update
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2020-10-20 21:00:57 +02:00 |
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ddae8085e1
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(v1.4.0.9002) bugfix
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2020-10-19 20:44:45 +02:00 |
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4e9ccb4435
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(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
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2020-10-19 17:09:19 +02:00 |
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28e77680c5
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(v1.4.0) matching score update
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2020-10-08 11:16:03 +02:00 |
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c04dc852cf
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(v1.3.0.9039) lifecycle updates, added excess kurtosis
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2020-10-04 21:02:16 +02:00 |
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baf510183c
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(v1.3.0.9038) prefinal 1.4.0
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2020-10-04 19:26:43 +02:00 |
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3136bc54aa
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(v1.3.0.9037) pre-release
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2020-09-30 10:54:23 +02:00 |
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ac1c78c793
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(v1.3.0.9036) documentation fix
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2020-09-30 10:24:53 +02:00 |
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4e0374af29
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(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
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2020-09-29 23:35:46 +02:00 |
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68e6e1e329
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(v1.3.0.9034) eucast_rules summary fix
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2020-09-29 10:40:25 +02:00 |
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36ec8b0d81
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(v1.3.0.9033) skimr fix
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2020-09-28 11:00:59 +02:00 |
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519aada54f
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(v1.3.0.9032) support skimr
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2020-09-28 01:08:55 +02:00 |
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22f6ceb3e4
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(v1.3.0.9031) matching score update
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2020-09-26 16:51:17 +02:00 |
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050a9a04fb
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(v1.3.0.9030) matching score update
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2020-09-26 16:26:01 +02:00 |
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9667c2994f
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(v1.3.0.9029) eucast rules fix, unique()
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2020-09-25 14:44:50 +02:00 |
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1d982a82b4
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(v1.3.0.9028) eucast fix
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2020-09-24 12:38:13 +02:00 |
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027215ed94
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(v1.3.0.9027) unit tests
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2020-09-24 00:50:23 +02:00 |
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c19095a3d5
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(v1.3.0.9026) eucast expert rules 3.2
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2020-09-24 00:30:11 +02:00 |
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2f0186ace2
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(v1.3.0.9024) optimalisation
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2020-09-19 12:57:51 +02:00 |
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d049cce69b
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(v1.3.0.9023) optimalisation
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2020-09-19 11:54:01 +02:00 |
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4e40e42011
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(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
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2020-09-18 16:05:53 +02:00 |
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89401ede9f
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(v1.3.0.9021) typo
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2020-09-14 20:41:19 +02:00 |
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ab60f613aa
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(v1.3.0.9020) fix for uncertainty in as.mo()
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2020-09-14 19:41:48 +02:00 |
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354c606d6a
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(v1.3.0.9019) small fix
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2020-09-14 14:08:07 +02:00 |
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7b6dd676f7
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(v1.3.0.9018) language corrections
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2020-09-14 12:21:23 +02:00 |
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0f6760d427
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(v1.3.0.9017) small fix
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2020-09-12 13:54:21 +02:00 |
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3ff871afeb
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(v1.3.0.9016) mo_uncertainties() overhaul
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2020-09-12 08:49:01 +02:00 |
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68e9cb78e9
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(v1.3.0.9015) as.mo() speedup for valid taxonomic names
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2020-09-03 20:59:21 +02:00 |
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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74a172ef55
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(v1.3.0.9010) S3 extensions without dependencies
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2020-08-28 21:55:47 +02:00 |
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81af0b001c
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(v1.3.0.9009) documentation update
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2020-08-26 16:13:40 +02:00 |
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9b8db57c65
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(v1.3.0.9008) also tibble printing for ab
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2020-08-26 15:34:12 +02:00 |
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5e45fdcf2a
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(v1.3.0.9007) tibble printing
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2020-08-26 11:33:54 +02:00 |
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c8c8bb4e3a
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(v1.3.0.9006) website update
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2020-08-21 11:40:13 +02:00 |
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dab017a50f
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(v1.3.0.9004) data sets, as.disk() improvement
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2020-08-16 21:38:42 +02:00 |
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e73f0e211c
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(v1.3.0.9003) as.rsi() speed improvement
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2020-08-15 12:54:47 +02:00 |
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08d62bb5d5
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(v1.3.0.9002) intrinsic_resistant data set
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2020-08-14 13:36:10 +02:00 |
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7d16bec21f
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(v1.3.0.9001) website update
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2020-08-10 12:46:03 +02:00 |
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0d9602a6a9
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(v1.3.0.9000) support across() in as.rsi()
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2020-08-10 11:44:58 +02:00 |
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c5f7294381
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(v1.3.0) skip more CRAN tests
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2020-07-31 10:50:08 +02:00 |
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c8edcb7439
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(v1.3.0) small fixes
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2020-07-30 15:15:52 +02:00 |
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8ff46eefe9
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(v1.3.0) small MIC fix
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2020-07-30 12:37:01 +02:00 |
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ea4e5e5b81
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(v1.3.0) v1.3.0
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2020-07-29 13:48:50 +02:00 |
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de0f7b8950
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(v1.2.0.9040) conserve_capped_values for as.rsi()
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2020-07-29 12:47:58 +02:00 |
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e7def0aa4c
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(v1.2.0.9039) conserve_capped_values for as.rsi()
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2020-07-29 11:46:59 +02:00 |
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453f7f210b
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(v1.2.0.9038) CLSI 2019 fix
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2020-07-29 10:33:47 +02:00 |
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1b65d76cfb
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(v1.2.0.9037) survey on website
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2020-07-28 18:39:57 +02:00 |
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ab2b359e6b
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(v1.2.0.9036) unit test fix
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2020-07-22 12:29:51 +02:00 |
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09fba38ea6
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(v1.2.0.9035) as.mo() speed improvement
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2020-07-22 10:24:23 +02:00 |
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6ab468362d
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(v1.2.0.9034) code cleaning
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2020-07-13 09:17:24 +02:00 |
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c0cf7ab02b
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(v1.2.0.9033) speed improvement mdro(), filter_ab_class()
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2020-07-12 11:43:31 +02:00 |
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1d66b5c43c
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(v1.2.0.9032) Permanently move to GitHub
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2020-07-09 20:07:39 +02:00 |
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cf3c3ee8f7
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(v1.2.0.9029) GitHub actions
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2020-07-08 22:55:17 +02:00 |
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76fc8e1b14
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(v1.2.0.9026) move to github
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2020-07-08 14:48:06 +02:00 |
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2134fc76e2
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(v1.2.0.9025) AMR calculation speed improvement
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2020-07-03 12:14:41 +02:00 |
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46cf423eab
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(v1.2.0.9024) AMR calculation speed improvement
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2020-07-03 10:51:55 +02:00 |
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152ac5bcad
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(v1.2.0.9023) ab_from_text() improvement
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2020-07-02 21:12:52 +02:00 |
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298e67a45b
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(v1.2.0.9022) as.ab() improvement
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2020-07-01 16:21:36 +02:00 |
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afc660dc33
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(v1.2.0.9021) only progressbar in interactive sessions
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2020-07-01 11:51:26 +02:00 |
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cc6ce0a938
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(v1.2.0.9020) ab_from_text() improvement
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2020-07-01 11:23:05 +02:00 |
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329a0eb0b6
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(v1.2.0.9019) ab_from_text() dose and administration
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2020-07-01 11:07:01 +02:00 |
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240d817b4e
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(v1.2.0.9018) ab_from_text() improvement
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2020-06-26 13:15:46 +02:00 |
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4f6f056077
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(v1.2.0.9017) ab_from_text() improvement
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2020-06-26 12:31:27 +02:00 |
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b31003c0b6
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(v1.2.0.9016) fix in rsi_calc()
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2020-06-26 10:21:22 +02:00 |
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033ca49817
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(v1.2.0.9015) ab_from_text()
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2020-06-25 19:20:50 +02:00 |
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344bbd57f4
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(v1.2.0.9014) ab_from_text()
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2020-06-25 17:34:50 +02:00 |
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8a66e475d7
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(v1.2.0.9013) unit test fix
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2020-06-22 13:18:40 +02:00 |
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779a4e8348
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(v1.2.0.9012) mo_domain(), improved error handling
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2020-06-22 12:18:53 +02:00 |
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93a158aebd
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(v1.2.0.9011) mo_domain(), improved error handling
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2020-06-22 11:18:40 +02:00 |
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e88d7853f5
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(v1.2.0.9010) documentation fix
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2020-06-17 21:35:10 +02:00 |
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f18389d5d6
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(v1.2.0.9009) pkg dependency fix
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2020-06-17 16:29:10 +02:00 |
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ac12392da3
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(v1.2.0.9008) ab_class improvement
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2020-06-17 15:14:37 +02:00 |
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c4d7412f36
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(v1.2.0.9007) Tidyverse selections
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2020-06-17 01:39:30 +02:00 |
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4f94e1312f
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(v1.2.0.9006) improve auto col-determination
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2020-06-11 20:03:13 +02:00 |
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8b692ecfcf
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(v1.2.0.9004) rsi_df() fix for groups
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2020-06-09 16:18:03 +02:00 |
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40221e5244
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(v1.2.0.9003) better terminal colour support
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2020-06-05 13:56:05 +02:00 |
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2c8d600914
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(v1.2.0.9002) fix for joins
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2020-06-03 14:33:55 +02:00 |
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5dc4c96b7d
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(v1.2.0.9001) filter_ab_class() update
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2020-06-03 11:48:00 +02:00 |
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02d07b9fb3
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(v1.2.0.9000) eucast_rules() fix for tibbles
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2020-06-02 16:05:56 +02:00 |
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b44e2c9202
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v1.2.0
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2020-05-28 16:48:55 +02:00 |
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d9a4b0bcaf
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(v1.1.0.9021) 1st isolates update
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2020-05-28 10:51:56 +02:00 |
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86d44054f0
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(v1.1.0.9020) updated taxonomy
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2020-05-27 16:37:49 +02:00 |
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ae1969b941
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(v1.1.0.9019) mo_source fix
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2020-05-25 01:01:14 +02:00 |
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f5ff2e6634
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(v1.1.0.9018) as.ab() update, added ab_url()
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2020-05-22 20:29:55 +02:00 |
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e467cc103e
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(v1.1.0.9017) as.ab() update, added ab_url()
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2020-05-22 20:15:19 +02:00 |
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1b1e243d14
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(v1.1.0.9016) small fix
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2020-05-21 12:28:57 +02:00 |
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743f9a5364
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(v1.1.0.9015) new default eucast_rules
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2020-05-20 12:00:17 +02:00 |
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5216d2b520
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(v1.1.0.9014) lose dependencies
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2020-05-19 14:16:45 +02:00 |
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cb1814f5ff
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(v1.1.0.9013) lose dependencies
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2020-05-19 13:18:01 +02:00 |
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19703eb5d3
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(v1.1.0.9012) lose dependencies
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2020-05-19 12:08:49 +02:00 |
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218fd08097
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(v1.1.0.9011) lose dependencies
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2020-05-18 13:59:34 +02:00 |
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d659c9baef
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(v1.1.0.9010) lose dependencies
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2020-05-18 11:09:02 +02:00 |
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bf0402a653
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(v1.1.0.9009) lose dependencies
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2020-05-18 10:30:53 +02:00 |
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f68d71a5e0
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(v1.1.0.9007) lose dependencies
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2020-05-16 21:40:50 +02:00 |
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29609a0e2c
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(v1.1.0.9006) lose dependencies
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2020-05-16 20:42:45 +02:00 |
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df2456b91f
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(v1.1.0.9005) lose dependencies
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2020-05-16 20:08:21 +02:00 |
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7f3da74b17
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(v1.1.0.9004) lose dependencies
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2020-05-16 13:05:47 +02:00 |
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5bdece1f9d
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(v1.1.0.9000) CI fix
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2020-04-30 09:05:03 +02:00 |
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b040185269
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(v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI
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2020-04-29 14:33:44 +02:00 |
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c2ffbd9f95
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(v1.0.1.9009) prepare for next release
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2020-04-15 11:30:28 +02:00 |
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4be54d608c
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(v1.0.1.9008) RIVM abbreviations for drugs
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2020-04-14 20:38:09 +02:00 |
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cde65141d9
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(v1.0.1.9007) small bugfix
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2020-04-14 15:10:09 +02:00 |
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7a6f819232
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(v1.0.1.9006) added generic CLSI rules
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2020-04-14 14:12:31 +02:00 |
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d1cb7d3b6f
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(v1.0.1.9005) as.mo() improvements
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2020-04-13 21:09:56 +02:00 |
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219cff403f
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(v1.0.1.9004) Support dplyr 1.0.0
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2020-03-14 14:05:43 +01:00 |
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77656a676c
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(v1.0.1.9002) PCA unit tests
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2020-03-08 11:18:59 +01:00 |
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9fc858f208
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(v1.0.1.9001) PCA unit tests
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2020-03-08 09:12:11 +01:00 |
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fa0d9c58d9
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(v1.0.1.9000) first PCA implementation
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2020-03-07 21:48:21 +01:00 |
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0d5e78b2cf
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(v1.0.0.9007) small doc fix
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2020-02-22 17:03:47 +01:00 |
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ea32e9916a
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(v1.0.0.9005) info printing only in interactive mode
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2020-02-21 21:13:38 +01:00 |
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47fe8b7820
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(v1.0.0.9004) add example_isolaten_unclean
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2020-02-21 16:05:19 +01:00 |
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bb3728f023
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(v1.0.0.9003) prepare for short update
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2020-02-21 13:13:34 +01:00 |
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6408911922
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(v1.0.0.9002) fix lintr
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2020-02-20 20:31:42 +01:00 |
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bdb26f624f
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(v1.0.0.9001) add uti to as.rsi()
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2020-02-20 17:21:01 +01:00 |
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c6184a0fb8
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(v0.9.0.9029) add uti to as.rsi()
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2020-02-20 13:19:23 +01:00 |
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c8981a563e
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(v0.9.0.9027) documentation fix
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2020-02-17 15:07:25 +01:00 |
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5e2b294351
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(v0.9.0.9026) update documentation
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2020-02-17 14:38:01 +01:00 |
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11f00f8a0a
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(v0.9.0.9025) update as.rsi documentation
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2020-02-16 22:43:56 +01:00 |
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c7a93af3d0
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(v0.9.0.9024) global vars fix
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2020-02-14 20:03:43 +01:00 |
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9b8b02960e
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(v0.9.0.9023) EUCAST 2020 guidelines
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2020-02-14 19:54:13 +01:00 |
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5a98e6b777
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(v0.9.0.9022) inheritance fix
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2020-02-10 14:18:15 +01:00 |
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b4356a299c
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(v0.9.0.9021) inheritance fix
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2020-02-10 12:25:02 +01:00 |
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c7a76ba713
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(v0.9.0.9020) as.mo() improvement
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2020-02-09 22:04:29 +01:00 |
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4e1c16c5a5
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(v0.9.0.9019) website update
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2020-02-01 15:09:36 +01:00 |
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f152ab9a48
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(v0.9.0.9018) Remove mo_history
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2020-01-31 23:27:38 +01:00 |
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1b80773c22
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(v0.9.0.9017) documentation fix
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2020-01-27 19:30:26 +01:00 |
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a13c62e6e8
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(v0.9.0.9016) Support SNOMED codes
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2020-01-27 19:14:23 +01:00 |
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9a3891efe4
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(v0.9.0.9014) Machine reading guidelines
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2020-01-27 11:05:39 +01:00 |
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423d1d3c41
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(v0.9.0.9013) Support for LOINC codes
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2020-01-26 20:38:54 +01:00 |
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449d9bde35
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(v0.9.0.9012) Support for LOINC codes
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2020-01-26 20:20:00 +01:00 |
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64f5ceef03
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(v0.9.0.9009) antibiotics data set update
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2020-01-08 11:30:33 +01:00 |
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ced1a7b7fa
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(v0.9.0.9008) Happy new year! Add lifecycles
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2020-01-05 17:22:09 +01:00 |
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db5dfff0ca
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(v0.9.0.9006) added CITATION file
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2019-12-22 11:43:38 +01:00 |
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ba3ce77f02
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(v0.9.0.9005) as.mo for G. species
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2019-12-21 10:56:06 +01:00 |
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2db2a2458a
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(v0.9.0.9003) as.mo() speedup for fullnames
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2019-12-20 15:05:58 +01:00 |
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a7e538e562
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(v0.9.0) website fixes
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2019-11-30 13:31:12 +01:00 |
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56ce9bf665
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(v0.9.0) website fixes
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2019-11-30 12:01:50 +01:00 |
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bb2ed55842
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(v0.9.0) v0.9.0
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2019-11-29 19:43:23 +01:00 |
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9feef53bde
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(v0.8.0.9037) complete documentation rewrite
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2019-11-28 23:00:37 +01:00 |
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c5f00f4a9f
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(v0.8.0.9036) complete documentation rewrite
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2019-11-28 22:32:17 +01:00 |
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7c28b392b1
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(v0.8.0.9035) add more mo codes
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2019-11-24 22:48:56 +01:00 |
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e53cc4990c
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(v0.8.0.9034) add cid to antivirals
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2019-11-23 12:39:57 +01:00 |
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267320f15f
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(v0.8.0.9033) antivirals data set, cleanup
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2019-11-18 12:10:47 +01:00 |
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67f3f4387b
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(v0.8.0.9032) fix regex error
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2019-11-15 16:50:46 +01:00 |
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09e2730b53
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(v0.8.0.9031) as.mo() improvements
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2019-11-15 15:25:03 +01:00 |
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248b45da71
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(v0.8.0.9030) depend on tidyr >= 1.0.0
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2019-11-11 10:46:39 +01:00 |
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d22834c5b8
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(v0.8.0.9029) cleanup
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2019-11-10 15:50:18 +01:00 |
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54b6322056
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(v0.8.0.9028) examples fix
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2019-11-10 13:17:20 +01:00 |
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59ededa8dc
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(v0.8.0.9027) adding susceptibility() and resistance()
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2019-11-10 12:16:56 +01:00 |
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ef640add2d
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(v0.8.0.9021) update vignettes
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2019-11-09 11:33:22 +01:00 |
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e2d05cb1b0
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(v0.8.0.9017) keywords update
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2019-11-06 14:43:23 +01:00 |
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a1fd2cd98a
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(v0.8.0.9014) unit test update
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2019-11-05 22:23:45 +01:00 |
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2560aa1a53
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(v0.8.0.9013) unit test update
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2019-11-05 21:52:58 +01:00 |
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5345d2759a
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(v0.8.0.9012) mdro improvement
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2019-11-05 11:28:52 +01:00 |
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fe606e287b
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(v0.8.0.9011) col guess update
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2019-11-04 12:08:08 +01:00 |
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9060233953
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(v0.8.0.9010) mdro bug fix
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2019-11-04 11:35:34 +01:00 |
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0bb531f3e0
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(v0.8.0.9009) unit test
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2019-11-03 22:41:29 +01:00 |
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29e448883d
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(v0.8.0.9008) new verbose mode for MDROs
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2019-11-03 22:24:42 +01:00 |
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09c4b04cd0
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(v0.8.0.9007) Enterobacterales order
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2019-10-30 23:02:50 +01:00 |
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7ff2ad8188
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(v0.8.0.9006) small typos
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2019-10-27 00:31:59 +02:00 |
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412077a6f2
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(v0.8.0.9005) fix unit tests
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2019-10-26 22:21:26 +02:00 |
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d2e8249edd
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(v0.8.0.9004) added MDR guideline by Magiorakos et al.
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2019-10-26 21:56:41 +02:00 |
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c01dc8a5b7
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(v0.8.0.9003) printing fix for AB columns
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2019-10-23 15:44:11 +02:00 |
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3e5ab53209
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(v0.8.0.9002) eucast_rules() fix for S. maltophilia
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2019-10-23 14:48:25 +02:00 |
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666126cd5e
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(v0.8.0.9001) guideline text on as.rsi()
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2019-10-21 14:12:28 +02:00 |
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10e6b225e7
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(v0.7.1.9107) v0.8.0
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2019-10-15 14:35:23 +02:00 |
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00cdb498a0
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(v0.7.1.9102) lintr
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2019-10-11 17:21:02 +02:00 |
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c8f6b97847
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(v0.7.1.9100) bug_drug speed, MIC levels
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2019-10-08 22:21:33 +02:00 |
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683d226fd3
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Update guess_ab_col.R
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2019-10-08 08:02:19 +00:00 |
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f479dfce60
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(v0.7.1.9097) mdro() examples fix
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2019-10-07 14:57:27 +02:00 |
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4e9c4c1b4e
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(v0.7.1.9096) German guideline for mdro()
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2019-10-07 14:32:06 +02:00 |
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1e260d85c8
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(v0.7.1.9095) get_column_abx() fix
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2019-10-06 22:19:26 +02:00 |
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3d5692219e
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(v0.7.1.9094) get_column_abx() improvement
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2019-10-06 21:44:08 +02:00 |
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b6653a620a
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(v0.7.1.9093) as.ab() fix
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2019-10-06 21:07:38 +02:00 |
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8bc4081b03
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(v0.7.1.9092) as.ab() improvements
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2019-10-04 15:36:12 +02:00 |
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edb599ae0b
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(v0.7.1.9091) percentage from clean pkg
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2019-09-30 16:45:36 +02:00 |
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b39e7feae6
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(v0.7.1.9090) factor levels of mdr_tb
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2019-09-26 21:58:06 +02:00 |
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b9f01d686e
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(v0.7.1.9089) eucast file update
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2019-09-25 22:37:40 +02:00 |
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99d0fe76dd
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(v0.7.1.9088) bug_drug improvement
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2019-09-25 15:43:22 +02:00 |
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04cd0d25db
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(v0.7.1.9087) small fix
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2019-09-23 23:09:50 +02:00 |
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38336d7408
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(v0.7.1.9086) small fix
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2019-09-23 23:00:18 +02:00 |
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ad5f211a8f
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(v0.7.1.9085) Salmonella fix
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2019-09-23 21:24:37 +02:00 |
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76dc948067
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(v0.7.1.9084) CI fix
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2019-09-23 20:55:54 +02:00 |
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8ce252fbc5
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(v0.7.1.9083) LIS code improvement
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2019-09-23 17:32:05 +02:00 |
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a8c6b8f9c4
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(v0.7.1.9082) CI fix
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2019-09-23 14:37:24 +02:00 |
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64d9829030
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(v0.7.1.9081) bug_drug fixes
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2019-09-23 13:53:50 +02:00 |
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66d405ff57
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(v0.7.1.9080) new LIS codes
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2019-09-22 17:19:59 +02:00 |
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57b0bd92a0
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(v0.7.1.9079) small fixes
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2019-09-22 12:41:45 +02:00 |
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46b61e9a70
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(v0.7.1.9078) unit tests
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2019-09-20 14:50:02 +02:00 |
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40e6b3e8f6
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(v0.7.1.9077) mo codes fix
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2019-09-20 14:18:29 +02:00 |
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3596adb295
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(v0.7.1.9076) mo codes
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2019-09-20 12:33:05 +02:00 |
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e2aa4f996b
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(v0.7.1.9075) new microorganism codes
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2019-09-18 15:46:09 +02:00 |
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f553a08a7b
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(v0.7.1.9074) CI updates
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2019-09-16 12:00:56 +02:00 |
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398c5bdc4f
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(v0.7.1.9073) as.mo() self-learning algorithm
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2019-09-15 22:57:30 +02:00 |
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cd178ee569
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(v0.7.1.9072) key_antibiotics() for foreign systems
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2019-09-12 15:08:53 +02:00 |
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b5d2a08401
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(v0.7.1.9071) p_symbol()
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2019-09-03 09:47:39 +02:00 |
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06b6266366
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(v0.7.1.9070) na.rm for age(), age_groups()
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2019-09-02 15:17:41 +02:00 |
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c7be72f0ce
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(v0.7.1.9069) documentation update
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2019-09-01 13:16:57 +02:00 |
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88ee1b7268
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(v0.7.1.9068) gramstain to freq()
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2019-08-30 14:50:56 +02:00 |
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