 dr. M.S. (Matthijs) Berends
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ec48f1d83b
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(v0.7.0.9003) scale fix
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2019-06-08 23:50:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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f02679fb63
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(v0.7.0.9001) new pathovars, small fixes
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2019-06-07 22:47:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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270aa0dd33
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v0.7.0
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2019-06-03 17:45:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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bd73988f15
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(v0.6.1.9053) prerelease fixes
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2019-06-02 19:23:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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5608b27c7c
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(v0.6.1.9051) support staged install
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2019-06-01 20:54:56 +02:00 |
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dr. M.S. (Matthijs) Berends
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4bac768557
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(v0.6.1.9048) data creation fox
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2019-05-31 21:01:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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0a6580b4eb
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(v0.6.1.9047) ggplot fix
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2019-05-31 20:48:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ed27c7e7a
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(v0.6.1.9046) ggplot fix
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2019-05-31 20:25:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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f03f71eced
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(v0.6.1.9045) age test fix
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2019-05-31 14:40:15 +02:00 |
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dr. M.S. (Matthijs) Berends
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493ae2ba0c
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(v0.6.1.9044) first_isolate fix for species
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2019-05-31 14:25:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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8b5e2b030b
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added boxplot for (grouped) freq()
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2019-05-29 19:56:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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27380fa021
|
fixes for microorganisms.codes
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2019-05-28 16:50:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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60983a1640
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added mdr_tb()
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2019-05-23 16:58:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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07d26cd485
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faster determination of abx
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2019-05-20 19:12:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ca00e1868
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speed improvement eucast_rules(), support more old MO codes
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2019-05-20 12:00:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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4c3cf85a65
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ab_info, other bug fixes
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2019-05-16 21:20:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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f6bf54b37d
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documentation fix
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2019-05-13 20:16:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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cc403169c6
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first isolate missing dates fix
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2019-05-13 14:56:23 +02:00 |
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dr. M.S. (Matthijs) Berends
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c4aa92b4a7
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fixed unit test
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2019-05-13 13:03:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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0dc0715dc6
|
CI tests
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2019-05-13 12:21:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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38a4421450
|
CI tests
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2019-05-13 10:10:16 +02:00 |
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dr. M.S. (Matthijs) Berends
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68cc7ef0d0
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new antibiotics
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2019-05-10 16:44:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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461eec9bac
|
cfta streptococci, codecov.yml
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2019-04-09 14:59:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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fbc9191b13
|
new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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dr. M.S. (Matthijs) Berends
|
713290a9a6
|
v0.6.1
|
2019-03-28 22:05:03 +01:00 |
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dr. M.S. (Matthijs) Berends
|
b25f2d6213
|
v0.6.1
|
2019-03-28 21:33:28 +01:00 |
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dr. M.S. (Matthijs) Berends
|
8a1d384d9c
|
ci fixes
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2019-03-26 15:34:04 +01:00 |
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dr. M.S. (Matthijs) Berends
|
afd12d5486
|
ci fixes
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2019-03-26 14:42:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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29f444543d
|
added Becker 2019
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2019-03-26 14:24:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6a12266e7
|
DSMZ data
|
2019-03-18 14:29:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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e18a1f1f17
|
as.mo improvement
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2019-03-15 17:36:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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fdffc2791b
|
memory for as.mo()
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2019-03-15 13:57:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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504a042fba
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uncertainty levels, new WHONET codes
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2019-03-12 12:19:27 +01:00 |
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dr. M.S. (Matthijs) Berends
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74e0ae21fd
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con WHONET, filter ab class
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2019-03-05 22:47:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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e835525cf6
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unknown codes, rsi fix
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2019-03-02 22:47:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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2565b60024
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rlang dependency, new fungi
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2019-02-28 13:56:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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cf3bdb54c7
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global var fix
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2019-02-27 19:02:47 +01:00 |
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dr. M.S. (Matthijs) Berends
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95c49fdf79
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global var fix
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2019-02-27 17:39:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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54162522bd
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age_groups fix
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2019-02-27 11:36:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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7f155c4e3a
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small units test
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2019-02-22 00:19:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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6c542268be
|
unit tests
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2019-02-21 23:32:30 +01:00 |
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dr. M.S. (Matthijs) Berends
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bd2a256969
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unit test
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2019-02-21 19:15:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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68a9a35ed6
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algorithm update
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2019-02-21 18:55:52 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6e57ca456
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website update
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2019-02-20 14:18:11 +01:00 |
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dr. M.S. (Matthijs) Berends
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616c8ab1ae
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mo_property
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2019-02-20 00:34:38 +01:00 |
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dr. M.S. (Matthijs) Berends
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d4f5d282ff
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appveyor fix
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2019-02-20 00:25:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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54f8258f8c
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Catalogue of Life, replaces ITIS
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2019-02-18 02:33:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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ed30312048
|
mo codes for WHONET
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2019-02-08 16:06:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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587e00b7be
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is.rsi.eligible update
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2019-02-04 12:24:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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6aae206320
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WHONET/EARS-Net support
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2019-01-29 00:06:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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f6336fdd89
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quasiquotation for freq()
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2019-01-28 11:20:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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f836722269
|
atc_ functions
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2019-01-26 23:22:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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f4ff98b470
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WHO update, antibiotics update
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2019-01-25 13:18:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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46dcc7e2e8
|
set_mo_source
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2019-01-21 15:53:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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046d195064
|
resistance predict
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2019-01-15 12:45:24 +01:00 |
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dr. M.S. (Matthijs) Berends
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5aad26035c
|
edited g.test
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2019-01-12 11:06:58 +01:00 |
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dr. M.S. (Matthijs) Berends
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641d866db2
|
guess_ab_col, benchmarks
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2019-01-11 20:37:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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0205b6178d
|
guess_mo deprecation
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2019-01-06 16:40:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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80ea555663
|
guess_ab
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2019-01-03 23:56:19 +01:00 |
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dr. M.S. (Matthijs) Berends
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6b2d464f8c
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big website update, licence txt update
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2019-01-02 23:24:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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2e4d703338
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eucast rules fix, 1st isolate fix, website update
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2018-12-31 01:48:53 +01:00 |
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dr. M.S. (Matthijs) Berends
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48f097c5b2
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roxygen2 dep
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2018-12-30 09:31:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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92a32b62a7
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new website, freq updates
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2018-12-29 22:24:19 +01:00 |
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dr. M.S. (Matthijs) Berends
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0b8084871d
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dplyr 0.8.0 support, fixes #7
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2018-12-22 22:39:34 +01:00 |
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dr. M.S. (Matthijs) Berends
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b937662a97
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limits for scale_y_percent - Licence update
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2018-12-16 22:45:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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2018d5b477
|
age and age_groups
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2018-12-15 22:40:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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e4737d3add
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date transformation fix for tibbles
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2018-12-14 09:31:53 +01:00 |
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dr. M.S. (Matthijs) Berends
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7e5fe75a17
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small text fixes
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2018-12-14 07:48:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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01a6d56334
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add kingdom to mo_taxonomy
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2018-12-10 21:47:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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9478ab71be
|
freq - decimals
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2018-12-10 10:13:40 +01:00 |
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dr. M.S. (Matthijs) Berends
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8e8a9cd190
|
AI improvements
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2018-12-07 12:04:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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87ad6da745
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gitlab ci
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2018-12-06 16:33:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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74a7f4453b
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small CI fix
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2018-12-06 16:07:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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60fe98bbbd
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better as.mo handling
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2018-12-06 14:36:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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31e977937d
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fix for as.mo and freq
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2018-11-30 12:05:59 +01:00 |
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dr. M.S. (Matthijs) Berends
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9ddf6dc530
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support A. species for as.mo, cleanup
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2018-11-24 20:25:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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a8132922af
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unit test read.4d, unselecting freq cols
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2018-11-19 13:00:22 +01:00 |
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dr. M.S. (Matthijs) Berends
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373e0cb32f
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unit test fail
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2018-11-16 21:57:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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4fcc2b409a
|
MDRO update
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2018-11-16 20:50:50 +01:00 |
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dr. M.S. (Matthijs) Berends
|
6b0f4ffbd4
|
new kingdom
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2018-11-09 13:11:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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9be5e0318b
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freq: fix na.rm in groups
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2018-11-08 16:10:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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84e08f516a
|
grouping var for freq
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2018-11-06 16:41:59 +01:00 |
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dr. M.S. (Matthijs) Berends
|
54368fafef
|
dont test french
|
2018-11-05 22:08:54 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d15bb2ab3f
|
read_4D
|
2018-11-05 15:30:49 +01:00 |
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dr. M.S. (Matthijs) Berends
|
d07e9b904e
|
new function get_locale
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2018-11-05 13:20:32 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
e548a7ad11
|
equal != identical
|
2018-11-02 15:04:48 +01:00 |
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dr. M.S. (Matthijs) Berends
|
d0bc05e5b1
|
speed improvement is.rsi.eligible
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2018-11-02 14:55:29 +01:00 |
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dr. M.S. (Matthijs) Berends
|
40a159e78d
|
more unit tests
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2018-11-02 10:27:57 +01:00 |
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dr. M.S. (Matthijs) Berends
|
5476fecc73
|
eucast update
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2018-11-01 20:23:33 +01:00 |
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dr. M.S. (Matthijs) Berends
|
9cd4ab928a
|
speed improvement as.mo, freq title
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2018-10-31 12:10:49 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
7997de6a6d
|
mdro and 1st isolate improvements
|
2018-10-23 11:15:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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c2a93b46db
|
breaks param, tidyr dep change, freq markdown
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2018-10-22 12:32:59 +02:00 |
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dr. M.S. (Matthijs) Berends
|
86b03577a7
|
fix for as.mo, added also_single_tested
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2018-10-19 13:53:31 +02:00 |
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dr. M.S. (Matthijs) Berends
|
b464dd524a
|
new verbose
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2018-10-19 00:17:03 +02:00 |
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dr. M.S. (Matthijs) Berends
|
693f64bdbf
|
new EUCAST rules: clinical breakpoints
|
2018-10-17 17:32:34 +02:00 |
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dr. M.S. (Matthijs) Berends
|
d5a41de711
|
parameter combine_IR
|
2018-10-16 09:59:31 +02:00 |
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dr. M.S. (Matthijs) Berends
|
5b5b95a47b
|
count_all and some fixes
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2018-10-12 16:35:18 +02:00 |
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dr. M.S. (Matthijs) Berends
|
67521394f6
|
more unit tests
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2018-10-09 15:41:44 +02:00 |
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dr. M.S. (Matthijs) Berends
|
95c9fdc552
|
CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
|
2018-10-09 13:53:33 +02:00 |
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dr. M.S. (Matthijs) Berends
|
ed17db0263
|
renamed year columns to ref
|
2018-10-01 14:44:40 +02:00 |