dr. M.S. (Matthijs) Berends
e601fd259a
test syntax fix
2018-11-01 20:50:10 +01:00
dr. M.S. (Matthijs) Berends
7997de6a6d
mdro and 1st isolate improvements
2018-10-23 11:15:05 +02:00
dr. M.S. (Matthijs) Berends
5965d3c794
replaced bactid by mo
2018-08-31 13:36:19 +02:00
dr. M.S. (Matthijs) Berends
d9e204031d
update to septic_patients, speed improvements
2018-07-25 14:17:04 +02:00
dr. M.S. (Matthijs) Berends
8421638b60
new class bactid
2018-07-23 14:14:03 +02:00
dr. M.S. (Matthijs) Berends
40de1b4ac2
man
2018-07-23 10:37:49 +02:00
dr. M.S. (Matthijs) Berends
9920ac8a5c
fix for keyab, more examples
2018-07-23 10:35:39 +02:00
dr. M.S. (Matthijs) Berends
ad662d7bab
new col names for `key_antibiotics`
2018-07-19 15:11:23 +02:00
dr. M.S. (Matthijs) Berends
2a4d759fbc
check fails
2018-07-17 14:48:11 +02:00
dr. M.S. (Matthijs) Berends
5cb9c541f8
new algorithm key abs
2018-07-17 13:02:05 +02:00
dr. M.S. (Matthijs) Berends
0a5898b17d
fix for printing tibbles, improve guess_bactid
2018-06-08 12:06:54 +02:00
dcc26dd942
Update freq function
2018-05-22 16:34:22 +02:00
dr. M.S. (Matthijs) Berends
53464ff1c8
- For functions `first_isolate`, `EUCAST_rules` the antibiotic column names are case-insensitive
...
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
dr. M.S. (Matthijs) Berends
dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be `points` or `keyantibiotics, see `?first_isolate`
...
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
dr. M.S. (Matthijs) Berends
502a44eb25
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species
...
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
2018-03-19 12:43:22 +01:00
dr. M.S. (Matthijs) Berends
d36a391747
export first_isolate
2018-02-26 12:15:52 +01:00
dr. M.S. (Matthijs) Berends
d8da8daf9a
First CRAN submission edits
2018-02-22 20:48:48 +01:00
dr. M.S. (Matthijs) Berends
62304dc23f
first commit
2018-02-21 11:52:31 +01:00
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