Commit Graph

836 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends ab97268f4c (v1.8.1.9014) add Toxoplasma 2022-08-12 23:27:15 +02:00
dr. M.S. (Matthijs) Berends 7f981e7778 (v1.8.1.9013) add Toxoplasma 2022-06-10 13:15:23 +02:00
dr. M.S. (Matthijs) Berends b84d647cac (v1.8.1.9012) update prevalence of some genera 2022-06-03 13:28:55 +02:00
dr. M.S. (Matthijs) Berends 70a07bad39 (v1.8.1.9010) random when pkg not loaded 2022-05-16 12:52:50 +02:00
dr. M.S. (Matthijs) Berends 2c5bc73ed6 (v1.8.1.9009) random when pkg not loaded 2022-05-16 09:29:46 +02:00
dr. M.S. (Matthijs) Berends 6de5375256 (v1.8.1.9007) website update 2022-05-11 10:10:31 +02:00
dr. M.S. (Matthijs) Berends 859224e9d0 (v1.8.1.9006) added EUCAST 2022 and CLSI 2022 2022-05-10 21:34:30 +02:00
dr. M.S. (Matthijs) Berends 680e8e7a41 (v1.8.1.9005) as.rsi() fix for EUCAST 2022-05-10 17:01:37 +02:00
dr. M.S. (Matthijs) Berends d4e22069bc (v1.8.1.9004) fix for table() on MICs 2022-05-09 21:33:27 +02:00
dr. M.S. (Matthijs) Berends 1c891cc90c (v1.8.1.9003) set_mo_source() fix 2022-05-09 20:36:44 +02:00
dr. M.S. (Matthijs) Berends 152db9d1b5 (v1.8.1.9002) fix for table() on MICs 2022-05-09 17:08:40 +02:00
dr. M.S. (Matthijs) Berends 4754848e96 (v1.8.1.9001) update unit tests, fixes #53 2022-04-08 11:02:45 +02:00
dr. M.S. (Matthijs) Berends ccb09706e4 v1.8.1 2022-03-24 23:05:04 +01:00
dr. M.S. (Matthijs) Berends 7b0f1596bd (v1.8.0.9010) as.mo improvement 2022-03-15 17:35:02 +01:00
dr. M.S. (Matthijs) Berends 1b0983e382 (v1.8.1) prerelease 1.8.1 2022-03-14 16:36:10 +01:00
dr. M.S. (Matthijs) Berends 08d387b5ce (v1.8.0.9005) as.rsi() fix 2022-03-10 19:33:25 +01:00
dr. M.S. (Matthijs) Berends ad82bb4ce0 (v1.8.0.9004) MIC printing in tibbles 2022-03-03 21:11:02 +01:00
dr. M.S. (Matthijs) Berends 3b2b2be5f8 (v1.8.0.9002) as.rsi() cleanup, more informative warnings 2022-03-02 15:38:55 +01:00
dr. M.S. (Matthijs) Berends 18e8525d10 (v1.8.0.9001) as.mo improvement, fixes #52 2022-02-26 21:58:23 +01:00
dr. M.S. (Matthijs) Berends f5dcf0ad58 v1.8.0 as accepted by CRAN 2022-01-07 16:27:13 +01:00
dr. M.S. (Matthijs) Berends 25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
dr. M.S. (Matthijs) Berends 75dac113b6 (v1.7.1.9077) skimr support only for newer R versions 2021-12-23 13:38:25 +01:00
dr. M.S. (Matthijs) Berends d9274bcd0a (v1.7.1.9075) assignment operator 2021-12-14 22:59:27 +01:00
dr. M.S. (Matthijs) Berends 76dee66852 (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
dr. M.S. (Matthijs) Berends bd4bb1d72f (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
dr. M.S. (Matthijs) Berends 5eef01165e (v1.7.1.9072) as.rsi() fix for UTIs 2021-12-14 12:33:29 +01:00
dr. M.S. (Matthijs) Berends 0cbf8f48b6 (v1.7.1.9071) rsi disk fix 2021-12-13 11:57:34 +01:00
dr. M.S. (Matthijs) Berends 578e7dfee9 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
dr. M.S. (Matthijs) Berends f90e27c1b0 (v1.7.1.9069) CLSI 2021 support 2021-12-12 11:36:58 +01:00
dr. M.S. (Matthijs) Berends 1e66a3daf3 (v1.7.1.9068) new logo, unit tests 2021-12-12 11:07:02 +01:00
dr. M.S. (Matthijs) Berends 56f1ce328a (v1.7.1.9067) Support for Swedish and Russian 2021-12-12 09:42:03 +01:00
dr. M.S. (Matthijs) Berends 5b5f70a103 (v1.7.1.9066) mdro EUCAST v3.3 2021-12-11 15:29:30 +01:00
dr. M.S. (Matthijs) Berends e0a2634f14 (v1.7.1.9065) unit tests 2021-12-11 15:13:44 +01:00
dr. M.S. (Matthijs) Berends 77ba4318ea (v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling 2021-12-11 13:41:31 +01:00
dr. M.S. (Matthijs) Berends e18c49ed93 (v1.7.1.9063) not_intrinsic_resistant 2021-12-09 10:48:25 +01:00
dr. M.S. (Matthijs) Berends 1fa3fc6af2 (v1.7.1.9061) bugfix set_ab_names 2021-12-05 23:21:59 +01:00
dr. M.S. (Matthijs) Berends 75965124ef (v1.7.1.9060) bugfix set_ab_names 2021-12-05 23:11:10 +01:00
dr. M.S. (Matthijs) Berends b747036deb (v1.7.1.9059) bugfix set_ab_names 2021-12-05 22:59:06 +01:00
dr. M.S. (Matthijs) Berends 7965468ccd (v1.7.1.9058) vars selection for set_ab_names() 2021-12-05 22:06:45 +01:00
dr. M.S. (Matthijs) Berends 3abe61fd61 (v1.7.1.9057) NAs in get_episode() 2021-12-02 13:32:14 +01:00
dr. M.S. (Matthijs) Berends 5375f75829 (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
dr. M.S. (Matthijs) Berends c8698347cb (v1.7.1.9055) added EUCAST 3.3 and all LPSN records numbers 2021-11-29 10:38:38 +01:00
dr. M.S. (Matthijs) Berends 694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
dr. M.S. (Matthijs) Berends 9a2c431e16 (v1.7.1.9053) fortify() methods 2021-11-01 13:51:13 +01:00
dr. M.S. (Matthijs) Berends 91149d6d35 (v1.7.1.9052) eucast-update 2021-10-06 16:22:36 +02:00
dr. M.S. (Matthijs) Berends 37e6e35ec4 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
dr. M.S. (Matthijs) Berends 8f5e5a3fc2 (v1.7.1.9050) fix for as.mo 2021-10-05 14:00:35 +02:00
dr. M.S. (Matthijs) Berends 2bcf28281d (v1.7.1.9049) unit tests 2021-10-05 09:58:08 +02:00
dr. M.S. (Matthijs) Berends 93a4734b44 (v1.7.1.9040) Support for Danish 2021-09-29 12:12:35 +02:00
dr. M.S. (Matthijs) Berends 81a1a432bd (v1.7.1.9038) dplyr grouping fix on windows? 2021-09-01 16:52:55 +02:00
dr. M.S. (Matthijs) Berends bcab74fb6d (v1.7.1.9037) dplyr grouping fix on windows? 2021-08-31 17:06:44 +02:00
dr. M.S. (Matthijs) Berends 986bd826ee (v1.7.1.9035) dplyr grouping fix on windows? 2021-08-30 15:43:12 +02:00
dr. M.S. (Matthijs) Berends 1daa117e9f (v1.7.1.9033) dplyr grouping fix on windows? 2021-08-30 15:01:32 +02:00
dr. M.S. (Matthijs) Berends 6ca6a3f6df (v1.7.1.9032) dplyr grouping fix on windows? 2021-08-30 14:17:27 +02:00
dr. M.S. (Matthijs) Berends e6ce25162e (v1.7.1.9031) dplyr grouping fix on windows? 2021-08-30 14:07:46 +02:00
dr. M.S. (Matthijs) Berends d6a916d70b (v1.7.1.9030) unit test 2021-08-29 23:50:45 +02:00
dr. M.S. (Matthijs) Berends 2ab21b7af3 (v1.7.1.9026) updated DDDs 2021-08-19 23:43:02 +02:00
dr. M.S. (Matthijs) Berends 1b62bab007 (v1.7.1.9025) unit tests 2021-08-18 23:19:38 +02:00
dr. M.S. (Matthijs) Berends a44283f998 (v1.7.1.9024) unit tests 2021-08-17 14:34:11 +02:00
dr. M.S. (Matthijs) Berends a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
dr. M.S. (Matthijs) Berends 4e1efd902c (v1.7.1.9022) rely on vctrs for ab selectors 2021-07-23 21:42:11 +02:00
dr. M.S. (Matthijs) Berends 0ec81cc12e (v1.7.1.9021) autoplot generics 2021-07-12 22:12:28 +02:00
dr. M.S. (Matthijs) Berends 6838f03bde (v1.7.1.9020) autoplot generics 2021-07-12 20:24:49 +02:00
dr. M.S. (Matthijs) Berends fc946564d1 (v1.7.1.9019) Morganella MIC in EUCAST 2021 2021-07-12 12:28:41 +02:00
dr. M.S. (Matthijs) Berends 5ccb330b42 (v1.7.1.9018) translation fix 2021-07-11 13:20:45 +02:00
dr. M.S. (Matthijs) Berends 39d97ab53b (v1.7.1.9017) ab selector error 2021-07-08 23:05:45 +02:00
dr. M.S. (Matthijs) Berends b228eb1536 (v1.7.1.9016) only_treatable ab selectors 2021-07-08 22:23:28 +02:00
dr. M.S. (Matthijs) Berends 625a6fb304 (v1.7.1.9015) removed S3 taxonomic_name again 2021-07-07 20:34:05 +02:00
dr. M.S. (Matthijs) Berends ad10693a1a (v1.7.1.9014) rep() for S3 classes 2021-07-06 16:35:14 +02:00
dr. M.S. (Matthijs) Berends 16b4c74d44 (v1.7.1.9013) temp fix for ggplot2 bug #4511 2021-07-04 22:10:46 +02:00
dr. M.S. (Matthijs) Berends 5b5741f681 (v1.7.1.9011) subsetting taxonomy fix 2021-07-04 15:26:50 +02:00
dr. M.S. (Matthijs) Berends 3bd50710e8 (v1.7.1.9010) fix for count_* and proportion_* 2021-07-04 12:00:41 +02:00
dr. M.S. (Matthijs) Berends 3e26929838 (v1.7.1.9009) fix for ab class selectors 2021-07-03 21:56:53 +02:00
dr. M.S. (Matthijs) Berends 95050ee3e0 (v1.7.1.9007) Updated antibiotics dataset, fixes #41 2021-06-23 10:03:17 +02:00
dr. M.S. (Matthijs) Berends d04e83f494 (v1.7.1.9005) ab class selectors for R-3.0 and R-3.1 2021-06-22 12:16:42 +02:00
dr. M.S. (Matthijs) Berends c44d9392ca (v1.7.1.9004) more extensive unit tests 2021-06-15 10:51:04 +02:00
dr. M.S. (Matthijs) Berends 556bf0014d (v1.7.1.9003) unit test 2021-06-14 22:37:05 +02:00
dr. M.S. (Matthijs) Berends 99be4c7e7e (v1.7.1.9002) ab class selectors update 2021-06-14 22:04:04 +02:00
dr. M.S. (Matthijs) Berends 683a0e748a (v1.7.1.9001) unit tests 2021-06-05 15:12:01 +02:00
dr. M.S. (Matthijs) Berends 1908e7cc7a (v1.7.1.9000) ab_class update, unit tests 2021-06-04 21:07:55 +02:00
dr. M.S. (Matthijs) Berends 7e70403efb (v1.7.1) New CRAN release 2021-06-03 15:19:21 +02:00
dr. M.S. (Matthijs) Berends bef0f42f66 (v1.7.0.9001) CLSI 2020 guideline 2021-06-01 15:33:06 +02:00
dr. M.S. (Matthijs) Berends f406319503 (v1.7.0.9000) package size 2021-05-30 22:14:38 +02:00
dr. M.S. (Matthijs) Berends a33c8a51a2 v1.7.0 2021-05-26 10:59:54 +02:00
dr. M.S. (Matthijs) Berends ac73a8d849 v1.7.0 2021-05-24 15:29:17 +02:00
dr. M.S. (Matthijs) Berends e5599bc694 (v1.6.0.9065) unit tests 2021-05-24 11:01:32 +02:00
dr. M.S. (Matthijs) Berends 4fbf9e1720 (v1.6.0.9064) prepare new release 2021-05-24 09:34:08 +02:00
dr. M.S. (Matthijs) Berends a13fd98e8b (v1.6.0.9063) prepare new release 2021-05-24 09:00:11 +02:00
dr. M.S. (Matthijs) Berends 06302d296a (v1.6.0.9062) code consistency 2021-05-24 00:06:28 +02:00
dr. M.S. (Matthijs) Berends 07939b1a14 (v1.6.0.9061) age() update 2021-05-23 23:11:16 +02:00
dr. M.S. (Matthijs) Berends b210f1327c (v1.6.0.9055) support codecov again 2021-05-21 20:20:51 +02:00
dr. M.S. (Matthijs) Berends 4a2a48b7c1 (v1.6.0.9052) unit tests 2021-05-20 11:42:39 +02:00
dr. M.S. (Matthijs) Berends 04ef5b28e7 (v1.6.0.9050) printing NA in custom_eucast_rules() 2021-05-20 10:10:40 +02:00
dr. M.S. (Matthijs) Berends 9a2879cba9 (v1.6.0.9049) unit tests 2021-05-20 00:07:27 +02:00
dr. M.S. (Matthijs) Berends 2413efd5c1 (v1.6.0.9048) ab selectors overhaul 2021-05-19 22:55:42 +02:00
dr. M.S. (Matthijs) Berends 6920c0be41 (v1.6.0.9047) filter_ab_class() fixes 2021-05-18 11:29:31 +02:00
dr. M.S. (Matthijs) Berends cfb7df823e (v1.6.0.9044) betalactams() selector 2021-05-18 00:53:04 +02:00
dr. M.S. (Matthijs) Berends be49131ed7 (v1.6.0.9043) translation update 2021-05-17 19:43:01 +02:00
dr. M.S. (Matthijs) Berends 83fec69a03 (v1.6.0.9042) translation update 2021-05-17 11:26:12 +02:00
dr. M.S. (Matthijs) Berends 916df6e90c (v1.6.0.9041) filter_ab_class() fix 2021-05-16 10:50:00 +02:00