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Commit Graph

68 Commits

Author SHA1 Message Date
2acdb1981c atc and bactid functions, readme update 2018-08-25 22:01:14 +02:00
227121af3d add Dialister to microorganisms 2018-08-03 11:46:06 +02:00
6262315527 Becker classification
Lancefield classification
Added Lancefield groups to `microorganisms` data set
2018-08-02 13:15:45 +02:00
d9e204031d update to septic_patients, speed improvements 2018-07-25 14:17:04 +02:00
8421638b60 new class bactid 2018-07-23 14:14:03 +02:00
c768ba0d9c A. lwoffi to A. lwoffii 2018-07-04 17:34:23 +02:00
34ee0247ac addins and small improvements to microorganisms dataset 2018-07-04 17:20:03 +02:00
0a5898b17d fix for printing tibbles, improve guess_bactid 2018-06-08 12:06:54 +02:00
uscloud
dcc26dd942 Update freq function 2018-05-22 16:34:22 +02:00
f05e7178cb added vignette of freq 2018-05-09 11:44:46 +02:00
970e3ed7f1 EUCAST rules for MDRO 2018-04-25 15:33:58 +02:00
3165c50d06 more MOs 2018-04-03 16:07:32 +02:00
53464ff1c8
- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
502a44eb25
- Added new function guess_bactid to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
2018-03-19 12:43:22 +01:00
34e70a65ed
added septic_patients 2018-02-27 20:01:02 +01:00
98b2b99913
new atc codes 2018-02-26 16:06:49 +01:00
8a603876d2
misc 2018-02-26 15:53:09 +01:00
62304dc23f
first commit 2018-02-21 11:52:31 +01:00