microorganisms.umcg.Rd
A data set containing all bacteria codes of UMCG MMB. These codes can be joined to data with an ID from microorganisms$mo
(using left_join_microorganisms
). GLIMS codes can also be translated to valid MO
s with guess_mo
.
microorganisms.umcg
A data.frame
with 1,095 observations and 2 variables:
umcg
Code of microorganism according to UMCG MMB
certe
Code of microorganism according to Certe MMB
On our website https://msberends.gitlab.io/AMR you can find a omprehensive tutorial about how to conduct AMR analysis and find the complete documentation of all functions, which reads a lot easier than in R.