dr. M.S. (Matthijs) Berends d232666e49 update sir to include interpretation details

2025-08-01 15:15:49 +02:00

..

aa_amr-package.R

(v2.1.1.9260) fix antibiogram

2025-04-29 16:15:18 +02:00

aa_globals.R

(v2.1.1.9270) Add support for Korean, fix ATCs

2025-05-04 14:24:43 +02:00

aa_helper_functions.R

(v3.0.0.9011) allow names for age_groups()

2025-07-17 19:32:46 +02:00

aa_helper_pm_functions.R

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

aa_options.R

(v2.1.1.9269) Support 7 new languages

2025-05-02 19:25:19 +02:00

ab_from_text.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

ab_property.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

ab.R

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

age.R

(v3.0.0.9011) allow names for age_groups()

2025-07-17 19:32:46 +02:00

amr_selectors.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

antibiogram.R

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

atc_online.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

av_from_text.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

av_property.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

av.R

(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

2025-05-16 16:55:29 +02:00

availability.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

bug_drug_combinations.R

(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

2025-05-16 16:55:29 +02:00

count.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

custom_antimicrobials.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

custom_eucast_rules.R

(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

2025-05-16 16:55:29 +02:00

custom_mdro_guideline.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

custom_microorganisms.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

data.R

(v3.0.0.9003) eucast_rules fix, new tidymodels integration

2025-06-13 14:03:21 +02:00

disk.R

(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

2025-05-16 16:55:29 +02:00

eucast_rules.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

export_biosample.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

first_isolate.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

g.test.R

AMR v3.0\!

2025-06-02 12:11:00 +02:00

get_episode.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

ggplot_pca.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

ggplot_sir.R

(v3.0.0.9015) plotting fix

2025-07-19 14:06:36 +02:00

guess_ab_col.R

(v2.1.1.9288) mdro fix

2025-06-01 15:35:04 +02:00

italicise_taxonomy.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

join_microorganisms.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

key_antimicrobials.R

(v2.1.1.9276) mdro() fix

2025-05-15 10:39:48 +02:00

kurtosis.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

like.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

mdro.R

(v2.1.1.9290) typo

2025-06-01 16:07:38 +02:00

mean_amr_distance.R

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

mic.R

(v3.0.0.9003) eucast_rules fix, new tidymodels integration

2025-06-13 14:03:21 +02:00

mo_matching_score.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

mo_property.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

mo_source.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

mo.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

pca.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

plotting.R

(v3.0.0.9016) fix for plotting

2025-07-23 22:05:20 +02:00

proportion.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

random.R

(v3.0.0.9004) random mic fix

2025-06-13 16:12:28 +02:00

resistance_predict.R

(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

2025-05-16 16:55:29 +02:00

sir_calc.R

(v3.0.0.9010) in as.sir(), add note when higher taxonomic levels are used

2025-07-17 19:06:12 +02:00

sir_df.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00

sir.R

update sir to include interpretation details

2025-08-01 15:15:49 +02:00

skewness.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

sysdata.rda

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

tidymodels.R

(v3.0.0.9011) allow names for age_groups()

2025-07-17 19:32:46 +02:00

top_n_microorganisms.R

(v2.1.1.9253) parallel computing

2025-04-26 15:47:00 +02:00

translate.R

(v3.0.0.9001) the first fixes

2025-06-04 13:10:20 +02:00

vctrs.R

(v3.0.0.9007) allow any tidyselect language in as.sir()

2025-07-17 14:29:35 +02:00

whocc.R

(v2.1.1.9236) documentation

2025-04-12 11:46:42 +02:00

zz_deprecated.R

(v2.1.1.9287) fix antibiotics

2025-06-01 12:17:47 +02:00

zzz.R

(v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD

2025-07-17 17:05:41 +02:00