AMR/R
dr. M.S. (Matthijs) Berends 0bcf55d3b6 improve `as.mo()` 2023-05-24 15:55:53 +02:00
..
aa_amr-package.R check for 2.0 2023-03-12 13:02:37 +01:00
aa_globals.R bind_rows 2023-02-10 17:09:48 +01:00
aa_helper_functions.R add oxygen tolerance 2023-05-11 21:56:27 +02:00
aa_helper_pm_functions.R fix for antibiograms on R < 3.5 2023-02-24 09:43:10 +01:00
aa_options.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
ab.R check for 2.0 2023-03-12 13:02:37 +01:00
ab_from_text.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
ab_property.R improve `as.mo()` 2023-05-24 15:55:53 +02:00
ab_selectors.R check for 2.0 2023-03-12 13:02:37 +01:00
age.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
antibiogram.R website 2023-03-20 21:59:50 +01:00
atc_online.R revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
av.R check for 2.0 2023-03-12 13:02:37 +01:00
av_from_text.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
av_property.R improve `as.mo()` 2023-05-24 15:55:53 +02:00
availability.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
bug_drug_combinations.R check for 2.0 2023-03-12 13:02:37 +01:00
count.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
custom_antimicrobials.R check for 2.0 2023-03-12 13:02:37 +01:00
custom_eucast_rules.R sort sir history 2023-01-23 15:01:21 +01:00
custom_microorganisms.R add oxygen tolerance 2023-05-11 21:56:27 +02:00
data.R add oxygen tolerance 2023-05-11 21:56:27 +02:00
disk.R revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
eucast_rules.R check for 2.0 2023-03-12 13:02:37 +01:00
first_isolate.R improve `as.mo()` 2023-05-24 15:55:53 +02:00
g.test.R prelim fix for g.test 2023-01-30 12:26:48 +01:00
get_episode.R documentation for 'data.table' AB selectors 2023-03-11 16:54:02 +01:00
ggplot_pca.R sort sir history 2023-01-23 15:01:21 +01:00
ggplot_sir.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
guess_ab_col.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
italicise_taxonomy.R website 2023-03-20 21:59:50 +01:00
join_microorganisms.R unit tests 2023-02-18 14:56:06 +01:00
key_antimicrobials.R support for old rsi arguments 2023-03-11 14:24:34 +01:00
kurtosis.R support new mo codes 2022-12-27 15:16:15 +01:00
like.R fix documentation 2023-03-16 08:55:37 +01:00
mdro.R support for old rsi arguments 2023-03-11 14:24:34 +01:00
mean_amr_distance.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
mic.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
mo.R improve `as.mo()` 2023-05-24 15:55:53 +02:00
mo_matching_score.R sort sir history 2023-01-23 15:01:21 +01:00
mo_property.R add oxygen tolerance 2023-05-11 21:56:27 +02:00
mo_source.R check for 2.0 2023-03-12 13:02:37 +01:00
pca.R revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
plot.R check for 2.0 2023-03-12 13:02:37 +01:00
proportion.R check for 2.0 2023-03-12 13:02:37 +01:00
random.R support for old rsi arguments 2023-03-11 14:24:34 +01:00
resistance_predict.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
sir.R improve `as.mo()` 2023-05-24 15:55:53 +02:00
sir_calc.R check for 2.0 2023-03-12 13:02:37 +01:00
sir_df.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
skewness.R support new mo codes 2022-12-27 15:16:15 +01:00
sysdata.rda add oxygen tolerance 2023-05-11 21:56:27 +02:00
translate.R make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
vctrs.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
whocc.R support new mo codes 2022-12-27 15:16:15 +01:00
zz_deprecated.R support for old rsi arguments 2023-03-11 14:24:34 +01:00
zzz.R fix documentation 2023-03-16 08:55:37 +01:00