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0c46f61260f7200f0e354de7d214d3368654f02e
AMR/R
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dr. M.S. (Matthijs) Berends 0c46f61260 MO group fixes
2023-07-12 15:04:48 +01:00
..
aa_amr-package.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
aa_globals.R
reftbl in plots, speedup for as.sir() and mo_validate
2023-07-10 16:43:46 +02:00
aa_helper_functions.R
interpretation fixes
2023-07-11 09:50:45 +02:00
aa_helper_pm_functions.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
aa_options.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_from_text.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_property.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_selectors.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab.R
cleanup
2023-07-11 14:29:40 +02:00
age.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
antibiogram.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
atc_online.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av_from_text.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av_property.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
availability.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
bug_drug_combinations.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
count.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_antimicrobials.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_eucast_rules.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
data.R
breakpoints UTI interpretation fix
2023-07-10 13:41:52 +02:00
disk.R
cleanup
2023-07-11 14:29:40 +02:00
eucast_rules.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
first_isolate.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
g.test.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
get_episode.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ggplot_pca.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ggplot_sir.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
guess_ab_col.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
italicise_taxonomy.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
join_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
key_antimicrobials.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
kurtosis.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
like.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mdro.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mean_amr_distance.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mic.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo_matching_score.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo_property.R
reftbl in plots, speedup for as.sir() and mo_validate
2023-07-10 16:43:46 +02:00
mo_source.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo.R
MO group fixes
2023-07-12 15:04:48 +01:00
pca.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
plot.R
fixes
2023-07-10 17:02:28 +02:00
proportion.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
random.R
random() fix
2023-07-08 21:00:49 +02:00
resistance_predict.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir_calc.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir_df.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir.R
add strep groups to ABCG
2023-07-12 11:41:25 +01:00
skewness.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sysdata.rda
MO group fixes
2023-07-12 15:04:48 +01:00
translate.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
vctrs.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
whocc.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
zz_deprecated.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
zzz.R
interpretation fixes
2023-07-11 09:50:45 +02:00