mirror of https://github.com/msberends/AMR.git
dr. M.S. (Matthijs) Berends
45e9546538
Merge branch 'development' of https://github.com/msberends/AMR into development # Conflicts: # docs/articles/AMR.html # docs/articles/AMR_files/figure-html/disk_plots-1.png # docs/articles/AMR_files/figure-html/disk_plots_mo_ab-1.png # docs/articles/AMR_files/figure-html/mic_plots-1.png # docs/articles/AMR_files/figure-html/mic_plots-2.png # docs/articles/AMR_files/figure-html/mic_plots_mo_ab-1.png # docs/articles/AMR_files/figure-html/mic_plots_mo_ab-2.png # docs/articles/AMR_files/figure-html/plot 1-1.png # docs/articles/AMR_files/figure-html/plot 3-1.png # docs/articles/AMR_files/figure-html/plot 4-1.png # docs/articles/AMR_files/figure-html/plot 5-1.png # docs/articles/EUCAST.html # docs/articles/MDR.html # docs/articles/PCA.html # docs/articles/PCA_files/figure-html/unnamed-chunk-6-1.png # docs/articles/PCA_files/figure-html/unnamed-chunk-7-1.png # docs/articles/SPSS.html # docs/articles/WHONET.html # docs/articles/WHONET_files/figure-html/unnamed-chunk-7-1.png # docs/articles/benchmarks.html # docs/articles/benchmarks_files/figure-html/unnamed-chunk-4-1.png # docs/articles/datasets.html # docs/articles/resistance_predict.html # docs/articles/resistance_predict_files/figure-html/unnamed-chunk-4-1.png # docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-1.png # docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-2.png # docs/articles/resistance_predict_files/figure-html/unnamed-chunk-6-1.png # docs/articles/resistance_predict_files/figure-html/unnamed-chunk-7-1.png # docs/articles/welcome_to_AMR.html # docs/news/index.html # docs/pkgdown.yml # docs/reference/AMR-deprecated.html # docs/reference/AMR.html # docs/reference/WHOCC.html # docs/reference/WHONET.html # docs/reference/antibiotics.html # docs/reference/catalogue_of_life.html # docs/reference/catalogue_of_life_version.html # docs/reference/dosage.html # docs/reference/example_isolates.html # docs/reference/example_isolates_unclean.html # docs/reference/g.test.html # docs/reference/intrinsic_resistant.html # docs/reference/microorganisms.codes.html # docs/reference/microorganisms.html # docs/reference/microorganisms.old.html # docs/reference/rsi_translation.html |
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| .. | ||
| figures | ||
| AMR-deprecated.html | ||
| AMR.html | ||
| WHOCC.html | ||
| WHONET.html | ||
| ab_from_text.html | ||
| ab_property.html | ||
| age.html | ||
| age_groups.html | ||
| antibiotic_class_selectors.html | ||
| antibiotics.html | ||
| as.ab.html | ||
| as.disk.html | ||
| as.mic.html | ||
| as.mo.html | ||
| as.rsi.html | ||
| atc_online.html | ||
| availability.html | ||
| bug_drug_combinations.html | ||
| catalogue_of_life.html | ||
| catalogue_of_life_version.html | ||
| count.html | ||
| custom_eucast_rules.html | ||
| dosage.html | ||
| eucast_rules.html | ||
| example_isolates.html | ||
| example_isolates_unclean.html | ||
| first_isolate.html | ||
| g.test.html | ||
| get_episode.html | ||
| ggplot_pca.html | ||
| ggplot_rsi.html | ||
| guess_ab_col.html | ||
| index.html | ||
| intrinsic_resistant.html | ||
| italicise_taxonomy.html | ||
| join.html | ||
| key_antimicrobials.html | ||
| kurtosis.html | ||
| lifecycle.html | ||
| like.html | ||
| mdro.html | ||
| microorganisms.codes.html | ||
| microorganisms.html | ||
| microorganisms.old.html | ||
| mo_matching_score.html | ||
| mo_property.html | ||
| mo_source.html | ||
| pca.html | ||
| plot.html | ||
| proportion.html | ||
| random.html | ||
| resistance_predict.html | ||
| rsi_translation.html | ||
| skewness.html | ||
| translate.html | ||