mirror of https://github.com/msberends/AMR.git
36 lines
784 B
R
36 lines
784 B
R
% Generated by roxygen2: do not edit by hand
|
|
% Please edit documentation in R/classes.R
|
|
\name{as.mic}
|
|
\alias{as.mic}
|
|
\alias{is.mic}
|
|
\title{Class 'mic'}
|
|
\usage{
|
|
as.mic(x, na.rm = FALSE)
|
|
|
|
is.mic(x)
|
|
}
|
|
\arguments{
|
|
\item{x}{vector}
|
|
|
|
\item{na.rm}{a logical indicating whether missing values should be removed}
|
|
}
|
|
\value{
|
|
New class \code{mic}
|
|
}
|
|
\description{
|
|
This transforms a vector to a new class\code{mic}, which is an ordered factor with valid MIC values as levels. Invalid MIC values will be translated as \code{NA} with a warning.
|
|
}
|
|
\examples{
|
|
mic_data <- as.mic(c(">=32", "1.0", "1", "1.00", 8, "<=0.128", "8", "16", "16"))
|
|
is.mic(mic_data)
|
|
plot(mic_data)
|
|
barplot(mic_data)
|
|
|
|
\donttest{
|
|
library(dplyr)
|
|
tbl \%>\%
|
|
mutate_at(vars(ends_with("_mic")), as.mic)
|
|
sapply(mic_data, is.mic)
|
|
}
|
|
}
|