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AMR/docs/reference
History
dr. M.S. (Matthijs) Berends 7a3139f7cc (v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
..
figures
(v1.5.0.9025) big plot and ggplot generics update
2021-02-25 10:33:08 +01:00
ab_from_text.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
ab_property.html
(v1.5.0.9019) use functions without loading AMR pkg
2021-02-17 10:58:13 +01:00
age_groups-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
age_groups.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
age.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
AMR-deprecated.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
AMR.html
(v1.5.0.9032) All group generics for MICs
2021-03-07 13:52:39 +01:00
antibiotic_class_selectors.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
antibiotics.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
as.ab.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
as.disk.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
as.mic-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.mic.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
as.mo.html
v1.6.0
2021-03-15 07:23:21 +01:00
as.rsi-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.rsi-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.rsi.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
atc_online.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
availability.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
bug_drug_combinations.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
catalogue_of_life_version.html
(v1.5.0.9031) math processing of MICs
2021-03-05 15:36:39 +01:00
catalogue_of_life.html
(v1.5.0.9031) math processing of MICs
2021-03-05 15:36:39 +01:00
count.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
custom_eucast_rules.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
dosage.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
eucast_rules.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
example_isolates_unclean.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
example_isolates.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
filter_ab_class.html
v1.6.0
2021-03-15 07:23:21 +01:00
first_isolate.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
g.test.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
get_episode.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
ggplot_pca-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_pca-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_pca.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
ggplot_rsi-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-3.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-4.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-5.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
guess_ab_col.html
v1.6.0
2021-03-15 07:23:21 +01:00
index.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
intrinsic_resistant.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
is_new_episode.html
(v1.4.0.9046) get_episode
2020-12-27 00:07:00 +01:00
isolate_identifier.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
join.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
key_antibiotics.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
kurtosis.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
lifecycle.html
v1.6.0
2021-03-15 07:23:21 +01:00
like.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
mdro.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
microorganisms.codes.html
(v1.5.0.9031) math processing of MICs
2021-03-05 15:36:39 +01:00
microorganisms.html
v1.6.0
2021-03-15 07:23:21 +01:00
microorganisms.old.html
(v1.5.0.9031) math processing of MICs
2021-03-05 15:36:39 +01:00
mo_matching_score.html
v1.6.0
2021-03-15 07:23:21 +01:00
mo_property.html
v1.6.0
2021-03-15 07:23:21 +01:00
mo_source.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
p_symbol.html
(v1.4.0.9000) more extensive unit tests
2020-10-15 09:46:41 +02:00
pca-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
pca-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
pca.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
plot.html
(v1.6.0.9000) custom EUCAST rules
2021-04-07 08:37:42 +02:00
proportion.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
random.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
resistance_predict-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-3.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-4.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict.html
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
Rplot001.png
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
rsi_translation.html
(v1.5.0.9031) math processing of MICs
2021-03-05 15:36:39 +01:00
skewness.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
translate.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
WHOCC.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
WHONET.html
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00