Matthijs Berends 8ff5d4472a Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

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ab_from_text.Rd

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ab_property.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

add_custom_antimicrobials.Rd

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add_custom_microorganisms.Rd

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age_groups.Rd

(v3.0.0.9011) allow names for age_groups()

2025-07-17 19:32:46 +02:00

age.Rd

(v2.1.1.9233) chore: make all argument texts full sentences

2025-03-31 14:53:24 +02:00

amr_course.Rd

(v3.0.1.9034) Add amr_course()

2026-03-11 16:07:31 +01:00

AMR-deprecated.Rd

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AMR-options.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

amr-tidymodels.Rd

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AMR.Rd

(v3.0.1.9041) add breakpoints 2026

2026-03-30 10:01:49 +02:00

antibiogram.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

antimicrobial_selectors.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

antimicrobials.Rd

(v3.0.1.9033) add ionophores(), clorobiocin, aminocoumarins group

2026-03-09 11:57:36 +01:00

as.ab.Rd

(v3.0.1.9026) fix ab_group(NA)

2026-03-06 12:41:27 +01:00

as.av.Rd

(v3.0.1.9018) fixes #249

2026-01-16 10:57:03 +01:00

as.disk.Rd

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as.mic.Rd

(v3.0.1.9041) add breakpoints 2026

2026-03-30 10:01:49 +02:00

as.mo.Rd

(v3.0.1.9027) Fixes #252 and add documentation update regarding #253

2026-03-06 13:10:33 +01:00

as.sir.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

atc_online.Rd

(v2.1.1.9233) chore: make all argument texts full sentences

2025-03-31 14:53:24 +02:00

av_from_text.Rd

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av_property.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

availability.Rd

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bug_drug_combinations.Rd

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clinical_breakpoints.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

count.Rd

(v3.0.1.9021) add guideline to resistance() and susceptibility()

2026-02-12 20:34:06 +01:00

custom_eucast_rules.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

custom_mdro_guideline.Rd

(v3.0.1.9033) add ionophores(), clorobiocin, aminocoumarins group

2026-03-09 11:57:36 +01:00

dosage.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

esbl_isolates.Rd

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example_isolates_unclean.Rd

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example_isolates.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

export_ncbi_biosample.Rd

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first_isolate.Rd

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g.test.Rd

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get_episode.Rd

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ggplot_pca.Rd

(v2.1.1.9233) chore: make all argument texts full sentences

2025-03-31 14:53:24 +02:00

ggplot_sir.Rd

(v3.0.0.9015) plotting fix

2025-07-19 14:06:36 +02:00

guess_ab_col.Rd

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interpretive_rules.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

intrinsic_resistant.Rd

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italicise_taxonomy.Rd

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join.Rd

(v2.1.1.9233) chore: make all argument texts full sentences

2025-03-31 14:53:24 +02:00

key_antimicrobials.Rd

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kurtosis.Rd

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like.Rd

(v2.1.1.9232) is.mic() iteration, documentation cleanup

2025-03-31 10:51:31 +02:00

mdro.Rd

(v3.0.1.9031) fix MDRO for non-RStudio terminal

2026-03-08 11:30:18 +01:00

mean_amr_distance.Rd

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microorganisms.codes.Rd

(v3.0.1.9041) add breakpoints 2026

2026-03-30 10:01:49 +02:00

microorganisms.groups.Rd

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microorganisms.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

mo_matching_score.Rd

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mo_property.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

mo_source.Rd

(v3.0.1.9037) improve cli messages

2026-03-22 20:44:37 +01:00

pca.Rd

(v2.1.1.9233) chore: make all argument texts full sentences

2025-03-31 14:53:24 +02:00

plot.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

proportion.Rd

(v3.0.1.9021) add guideline to resistance() and susceptibility()

2026-02-12 20:34:06 +01:00

random.Rd

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resistance_predict.Rd

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skewness.Rd

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top_n_microorganisms.Rd

Add add_if_missing parameter to control NA handling in interpretive rules (#264)

2026-04-21 21:53:43 +02:00

translate.Rd

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WHOCC.Rd

new Norwegian link

2024-03-03 23:24:57 +01:00

WHONET.Rd

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