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Code Releases Activity
AMR/R
History
dr. M.S. (Matthijs) Berends 91fa73dedf add oxygen tolerance
2023-05-11 21:56:27 +02:00
..
aa_amr-package.R
check for 2.0
2023-03-12 13:02:37 +01:00
aa_globals.R
bind_rows
2023-02-10 17:09:48 +01:00
aa_helper_functions.R
add oxygen tolerance
2023-05-11 21:56:27 +02:00
aa_helper_pm_functions.R
fix for antibiograms on R < 3.5
2023-02-24 09:43:10 +01:00
aa_options.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
ab_from_text.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
ab_property.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
ab_selectors.R
check for 2.0
2023-03-12 13:02:37 +01:00
ab.R
check for 2.0
2023-03-12 13:02:37 +01:00
age.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
antibiogram.R
website
2023-03-20 21:59:50 +01:00
atc_online.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
av_from_text.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
av_property.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
av.R
check for 2.0
2023-03-12 13:02:37 +01:00
availability.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
bug_drug_combinations.R
check for 2.0
2023-03-12 13:02:37 +01:00
count.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
custom_antimicrobials.R
check for 2.0
2023-03-12 13:02:37 +01:00
custom_eucast_rules.R
sort sir history
2023-01-23 15:01:21 +01:00
custom_microorganisms.R
add oxygen tolerance
2023-05-11 21:56:27 +02:00
data.R
add oxygen tolerance
2023-05-11 21:56:27 +02:00
disk.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
eucast_rules.R
check for 2.0
2023-03-12 13:02:37 +01:00
first_isolate.R
patient ID in first isolate
2023-03-11 17:13:19 +01:00
g.test.R
prelim fix for g.test
2023-01-30 12:26:48 +01:00
get_episode.R
documentation for 'data.table' AB selectors
2023-03-11 16:54:02 +01:00
ggplot_pca.R
sort sir history
2023-01-23 15:01:21 +01:00
ggplot_sir.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
guess_ab_col.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
italicise_taxonomy.R
website
2023-03-20 21:59:50 +01:00
join_microorganisms.R
unit tests
2023-02-18 14:56:06 +01:00
key_antimicrobials.R
support for old rsi arguments
2023-03-11 14:24:34 +01:00
kurtosis.R
support new mo codes
2022-12-27 15:16:15 +01:00
like.R
fix documentation
2023-03-16 08:55:37 +01:00
mdro.R
support for old rsi arguments
2023-03-11 14:24:34 +01:00
mean_amr_distance.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mic.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mo_matching_score.R
sort sir history
2023-01-23 15:01:21 +01:00
mo_property.R
add oxygen tolerance
2023-05-11 21:56:27 +02:00
mo_source.R
check for 2.0
2023-03-12 13:02:37 +01:00
mo.R
add oxygen tolerance
2023-05-11 21:56:27 +02:00
pca.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
plot.R
check for 2.0
2023-03-12 13:02:37 +01:00
proportion.R
check for 2.0
2023-03-12 13:02:37 +01:00
random.R
support for old rsi arguments
2023-03-11 14:24:34 +01:00
resistance_predict.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
sir_calc.R
check for 2.0
2023-03-12 13:02:37 +01:00
sir_df.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
sir.R
check for 2.0
2023-03-12 13:02:37 +01:00
skewness.R
support new mo codes
2022-12-27 15:16:15 +01:00
sysdata.rda
add oxygen tolerance
2023-05-11 21:56:27 +02:00
translate.R
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
vctrs.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
whocc.R
support new mo codes
2022-12-27 15:16:15 +01:00
zz_deprecated.R
support for old rsi arguments
2023-03-11 14:24:34 +01:00
zzz.R
fix documentation
2023-03-16 08:55:37 +01:00