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Code Releases Activity
AMR/R
History
dr. M.S. (Matthijs) Berends a4dc37a4e4 (v2.1.1.9057) fix for missing breakpoints
2024-06-17 16:52:12 +02:00
..
aa_amr-package.R
v2.1.1
2023-10-22 15:51:27 +02:00
aa_globals.R
(v2.1.1.9048) vctrs update for sir
2024-06-13 20:55:17 +02:00
aa_helper_functions.R
(v2.1.1.9053) add verbose to as.sir(), unit test fix
2024-06-17 10:38:45 +02:00
aa_helper_pm_functions.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
aa_options.R
support veterinary MIC/disk translation
2024-02-24 15:16:52 +01:00
ab_from_text.R
allow column name for ab in as.sir()
2024-05-20 21:29:13 +02:00
ab_property.R
new Norwegian link
2024-03-03 23:24:57 +01:00
ab_selectors.R
(v2.1.1.9052) unit test fix
2024-06-16 20:53:50 +02:00
ab.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
age.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
antibiogram.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
atc_online.R
new Norwegian link
2024-03-03 23:24:57 +01:00
av_from_text.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av_property.R
new Norwegian link
2024-03-03 23:24:57 +01:00
av.R
new Norwegian link
2024-03-03 23:24:57 +01:00
availability.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
bug_drug_combinations.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
count.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
custom_antimicrobials.R
new Norwegian link
2024-03-03 23:24:57 +01:00
custom_eucast_rules.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
custom_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
data.R
(v2.1.1.9057) fix for missing breakpoints
2024-06-17 16:52:12 +02:00
disk.R
update MIC comparisons
2024-04-05 16:44:43 +02:00
eucast_rules.R
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
export_biosample.R
(v2.1.1.9043) fix sir translation with as.double
2024-06-10 10:34:45 +02:00
first_isolate.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
g.test.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
get_episode.R
prepare for CRAN
2023-10-20 14:51:48 +02:00
ggplot_pca.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
ggplot_sir.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
guess_ab_col.R
rename pre-commit hook to pre-commit checks (no-check)
2024-04-23 10:55:48 +02:00
italicise_taxonomy.R
Added support for 'html' in italicize_taxonomy() (#134)
2024-02-13 13:47:07 +01:00
join_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
key_antimicrobials.R
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
kurtosis.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
like.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mdro.R
new SDD and N for as.sir()
2024-05-20 15:27:04 +02:00
mean_amr_distance.R
update MIC comparisons
2024-04-05 16:44:43 +02:00
mic.R
(v2.1.1.9041) antibiotics update
2024-06-08 17:35:25 +02:00
mo_matching_score.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo_property.R
new mo_group_members()
2024-04-19 10:18:21 +02:00
mo_source.R
support veterinary MIC/disk translation
2024-02-24 15:16:52 +01:00
mo.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
pca.R
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
plot.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
proportion.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
random.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
resistance_predict.R
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
sir_calc.R
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
sir_df.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir.R
(v2.1.1.9057) fix for missing breakpoints
2024-06-17 16:52:12 +02:00
skewness.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sysdata.rda
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
translate.R
(v2.1.1.9042) update translations and example isolates
2024-06-09 11:31:04 +02:00
vctrs.R
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
whocc.R
new Norwegian link
2024-03-03 23:24:57 +01:00
zz_deprecated.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
zzz.R
(v2.1.1.9053) add verbose to as.sir(), unit test fix
2024-06-17 10:38:45 +02:00