dr. M.S. (Matthijs) Berends 510140fc55 Updated `mo_gramstain()` to reflect current taxonomy, fixes #83		2022-12-09 10:30:25 +01:00
..
aa_globals.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
aa_helper_functions.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00
aa_helper_pm_functions.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
ab.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
ab_from_text.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
ab_property.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
ab_selectors.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
add_custom_antimicrobials.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
age.R	documentation fix	2022-11-05 08:18:06 +01:00
amr.R	Implement extensive support for antiviral agents support (#77)	2022-11-13 08:46:10 +01:00
atc_online.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
av.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
av_from_text.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
av_property.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
availability.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
bug_drug_combinations.R	new rsi_translation	2022-10-22 22:00:15 +02:00
count.R	add confidence intervals (fixed #70), remove `combine_IR`	2022-10-20 16:08:01 +02:00
custom_eucast_rules.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
data.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
deprecated.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
disk.R	add column to `as.mic()` and `as.disk()` warnings	2022-11-28 19:39:52 +01:00
episode.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
eucast_rules.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
first_isolate.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
g.test.R	fix for `NA` in `as.ab()`	2022-10-10 15:44:59 +02:00
ggplot_pca.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
ggplot_rsi.R	add confidence intervals (fixed #70), remove `combine_IR`	2022-10-20 16:08:01 +02:00
guess_ab_col.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
italicise_taxonomy.R	move object assignment to AMR_env	2022-10-14 13:02:50 +02:00
join_microorganisms.R	move object assignment to AMR_env	2022-10-14 13:02:50 +02:00
key_antimicrobials.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
kurtosis.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
like.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
mdro.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00
mean_amr_distance.R	mean AMR distance	2022-10-21 16:02:14 +02:00
mic.R	add column to `as.mic()` and `as.disk()` warnings	2022-11-28 19:39:52 +01:00
mo.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00
mo_matching_score.R	move object assignment to AMR_env	2022-10-14 13:02:50 +02:00
mo_property.R	Updated `mo_gramstain()` to reflect current taxonomy, fixes #83	2022-12-09 10:30:25 +01:00
mo_source.R	remove warnings from unit tests	2022-10-19 11:47:57 +02:00
pca.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
plot.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
proportion.R	completely updated `antibiotics`	2022-10-30 14:31:45 +01:00
random.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
resistance_predict.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
rsi.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00
rsi_calc.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00
rsi_df.R	add confidence intervals (fixed #70), remove `combine_IR`	2022-10-20 16:08:01 +02:00
skewness.R	expert rules 12.0	2022-11-14 15:20:39 +01:00
sysdata.rda	expert rules 12.0	2022-11-14 15:20:39 +01:00
translate.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
vctrs.R	cleanup and new intro logo	2022-11-13 13:44:25 +01:00
whocc.R	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
zzz.R	revised `as.rsi()`, fix for `mdro()`	2022-11-24 20:29:00 +01:00