.. |
_install_deps.R
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
_language_update.R
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
_pre_commit_hook.R
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incorporate Bartlett et al (2022)
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2022-12-19 15:32:41 +01:00 |
ab.md5
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
AMR_intro.ai
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
antibiotics.dta
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.feather
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.parquet
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.rds
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.sas
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.sav
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.txt
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antibiotics.xlsx
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
antivirals.dta
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.feather
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.parquet
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.rds
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.sas
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.sav
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.txt
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
antivirals.xlsx
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
av.md5
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
bartlett_et_al_2022_human_pathogens.xlsx
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
create_survey_page.R
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(v1.2.0.9037) survey on website
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2020-07-28 18:39:57 +02:00 |
dosage.dta
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.feather
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.md5
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.parquet
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.rds
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.sas
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.sav
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.txt
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
dosage.xlsx
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
Dosages_v_11.0_Breakpoint_Tables.xlsx
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
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2021-01-12 22:08:04 +01:00 |
Dosages_v_12.0_Breakpoint_Tables.pdf
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
Dosages_v_12.0_Breakpoint_Tables.xlsx
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
eucast_rules.tsv
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unit tests
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2022-12-20 22:18:50 +01:00 |
extractATCs.R
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
Intrinsic_Resistance_and_Unusual_Phenotypes_Tables_v3.3_20211018.pdf
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(v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup
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2021-11-28 23:01:26 +01:00 |
intrinsic_resistant.dta
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.feather
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.md5
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(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
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2021-12-11 13:41:31 +01:00 |
intrinsic_resistant.parquet
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.rds
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.sas
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.sav
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.txt
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsic_resistant.xlsx
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
intrinsicR.md5
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
logo.svg
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(v1.7.1.9068) new logo, unit tests
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2021-12-12 11:07:02 +01:00 |
Loinc.csv
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
loinc.R
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
microorganisms.dta
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.feather
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.md5
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.parquet
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.rds
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.sas
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.sav
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.txt
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
microorganisms.xlsx
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
mo.md5
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language updates
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2022-08-19 12:33:14 +02:00 |
poorman_prepend.R
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
read_EUCAST.R
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
reproduction_of_antibiotics.R
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
reproduction_of_antivirals.R
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
reproduction_of_dosage.R
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
reproduction_of_example_isolates_unclean.R
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
reproduction_of_intrinsic_resistant.R
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updated taxonomy
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2022-12-12 00:14:56 +01:00 |
reproduction_of_microorganisms.R
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
reproduction_of_poorman.R
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
reproduction_of_rsi_translation.R
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
rsi_translation.dta
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.feather
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.parquet
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.rds
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.sas
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.sav
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.txt
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi_translation.xlsx
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
rsi.md5
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
salmonellae.R
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
SNOMED_PHVS_Microorganism_CDC_V12.txt
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(v1.5.0.9041) SNOMED update
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2021-03-11 21:42:30 +01:00 |
taxonomy0.rds
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
taxonomy1.rds
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
taxonomy2.rds
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
taxonomy3.rds
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
taxonomy_gbif.rds
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updated taxonomy
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2022-12-12 00:14:56 +01:00 |
taxonomy_lpsn.rds
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updated taxonomy
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2022-12-12 00:14:56 +01:00 |
tinytest_1.3.1.tar.gz
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(v1.7.1.9033) dplyr grouping fix on windows?
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2021-08-30 15:01:32 +02:00 |
toxoplasma.R
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
translations.tsv
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
v_10.0_Breakpoint_Tables.xlsx
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(v0.9.0.9022) inheritance fix
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2020-02-10 14:18:15 +01:00 |
v_11.0_Breakpoint_Tables.xlsx
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
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2021-01-12 22:08:04 +01:00 |
v_12.0_Breakpoint_Tables.xlsx
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(v1.8.1.9007) website update
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2022-05-11 10:10:31 +02:00 |
whonet_bugfixes.R
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(v1.7.1.9050) fix for as.mo
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2021-10-05 14:00:35 +02:00 |