P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-04-16 12:30:31 +02:00
Code Releases Activity
AMR/docs/reference
History
dr. M.S. (Matthijs) Berends e95218c0d1 (v1.5.0.9005) custom MDRO guideline
2021-01-17 10:35:21 +01:00
..
figures
(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
2020-09-29 23:35:46 +02:00
ab_from_text.html
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
ab_property.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
age_groups-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
age_groups.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
age.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
AMR-deprecated.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
AMR.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
antibiotic_class_selectors.html
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
antibiotics.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
as.ab.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
as.disk.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
as.mic-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.mic.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
as.mo.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
as.rsi-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.rsi-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
as.rsi.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
atc_online.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
availability.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
bug_drug_combinations.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
catalogue_of_life_version.html
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
catalogue_of_life.html
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
count.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
dosage.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
eucast_rules.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
example_isolates_unclean.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
example_isolates.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
filter_ab_class.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
first_isolate.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
g.test.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
get_episode.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
ggplot_pca-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_pca-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_pca.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
ggplot_rsi-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-3.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-4.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi-5.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ggplot_rsi.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
guess_ab_col.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
index.html
(v1.5.0.9005) custom MDRO guideline
2021-01-17 10:35:21 +01:00
intrinsic_resistant.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
is_new_episode.html
(v1.4.0.9046) get_episode
2020-12-27 00:07:00 +01:00
isolate_identifier.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
join.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
key_antibiotics.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
kurtosis.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
lifecycle.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
like.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
mdro.html
(v1.5.0.9004) custom MDRO guideline
2021-01-17 00:26:48 +01:00
microorganisms.codes.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
microorganisms.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
microorganisms.old.html
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
mo_matching_score.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
mo_property.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
mo_source.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
p_symbol.html
(v1.4.0.9000) more extensive unit tests
2020-10-15 09:46:41 +02:00
pca-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
pca-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
pca.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
plot.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
proportion.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
random.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
resistance_predict-1.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-2.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-3.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict-4.png
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
resistance_predict.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
Rplot001.png
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
rsi_translation.html
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
skewness.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
translate.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
WHOCC.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
WHONET.html
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00