updated configuration for cluster deployment

charts/opal/templates/deployment.yaml

@@ -74,7 +74,7 @@ spec:
       volumes:
         - name: opal-nfs
           persistentVolumeClaim:
-            claimName: {{ .Values.opal.persistence.claim }}
+            claimName: {{ .Release.Name }}-{{ .Values.opal.persistence.claim }}
 {{- end }}
 
     {{- with .Values.nodeSelector }}

charts/opal/templates/opal-pvc.yaml

@@ -3,7 +3,7 @@ apiVersion: extensions/v1beta1
 kind: PersistentVolumeClaim
 apiVersion: v1
 metadata:
-  name: {{ .Values.opal.persistence.claim }}
+  name: {{ .Release.Name }}-{{ .Values.opal.persistence.claim }}
   annotations:
     {{- if .Values.persistence.retain }}
     volume.beta.kubernetes.io/storage-class: "nfs-provisioner-retain"

charts/opal/templates/persistence/mysql-pvc.yaml

@@ -1,19 +0,0 @@
-{{- if .Values.persistence.enabled }}
-apiVersion: extensions/v1beta1
-kind: PersistentVolumeClaim
-apiVersion: v1
-metadata:
-  name: {{ .Values.mysql.persistence.claim }}
-  annotations:
-    {{- if .Values.persistence.retain }}
-    volume.beta.kubernetes.io/storage-class: "nfs-provisioner-retain"
-    {{- else }}
-    volume.beta.kubernetes.io/storage-class: "nfs-provisioner"
-    {{- end }}
-spec:
-  accessModes:
-    - ReadWriteMany
-  resources:
-    requests:
-      storage: {{ .Values.mysql.persistence.size }}
-{{- end }}

charts/opal/values.yaml

@@ -3,7 +3,7 @@
 replicaCount: 1
 
 service:
-  type: LoadBalancer
+  type: ClusterIP
   port: 8080
 
 ingress:
@@ -11,7 +11,7 @@ ingress:
   annotations:
     nginx.ingress.kubernetes.io/proxy-body-size: "0"
   hosts:
-   - name: opal.dev.molgenis.org
+    - opal.dev.molgenis.org
   path: /
   tls: []
 
@@ -36,6 +36,7 @@ opal:
   adminPassword:
   persistence:
     claim: pvc-opal
+    size: 10Gi
   services:
     rserver:
       host: localhost
@@ -48,10 +49,6 @@ rserver:
     tag: latest
     pullPolicy: IfNotPresent
 
-mysql:
-  persistence:
-    size: 10Gi
-
 persistence:
   enabled: true
   retain: false