12 Commits

Author	SHA1	Message	Date
J.v.N.	65d7193848	Merge branch 'master' into step3/star-alignment-snippet	2021-02-15 17:08:31 +01:00
Jos van Nijnatten	6cf40804c4	adapter comments	2021-02-15 17:03:34 +01:00
Jos van Nijnatten	51abdcdb26	Trimmomatic update (simplified)	2021-02-15 16:48:39 +01:00
J.v.N.	4c52527340	Merge branch 'master' into master	2021-02-15 16:18:28 +01:00
Jos van Nijnatten	170a001729	Count reads in X and Y chromosome.	2021-02-15 12:54:31 +01:00
C. Qi	4b61c099f6	Update 'rnaseq/step2_trim/snippet.sh'	2021-02-13 19:13:13 +01:00
Hylke C. Donker	1037d154e3	Small snippet that generates a genome index and aligns the RNAseq reads.	2021-02-12 14:46:05 +01:00
Jos van Nijnatten	648cd09a0e	fastqc: simple comment. trimming: reverted back. overall qc: simplified the scripts and made sure to add instructions.	2021-02-10 13:42:51 +01:00
Jos van Nijnatten	135f231c86	Remove whitespace, MacOS specific files.	2021-02-09 15:39:35 +01:00
Jos van Nijnatten	58bd93171c	Test change	2021-02-09 15:15:59 +01:00
Jos van Nijnatten	3d7c9e3b1c	FastQC, Trimming, Overall QC (initial)	2021-02-09 12:52:44 +01:00
Hylke C. Donker	7ecbc2aee9	Template structure.	2021-02-09 11:20:27 +01:00