2019-01-02 23:24:07 +01:00
|
|
|
/*
|
|
|
|
# ==================================================================== #
|
|
|
|
# TITLE #
|
2021-02-02 23:57:35 +01:00
|
|
|
# Antimicrobial Resistance (AMR) Data Analysis for R #
|
2019-01-02 23:24:07 +01:00
|
|
|
# #
|
|
|
|
# SOURCE #
|
2020-07-08 14:48:06 +02:00
|
|
|
# https://github.com/msberends/AMR #
|
2019-01-02 23:24:07 +01:00
|
|
|
# #
|
|
|
|
# LICENCE #
|
2020-12-27 00:30:28 +01:00
|
|
|
# (c) 2018-2021 Berends MS, Luz CF et al. #
|
2020-10-08 11:16:03 +02:00
|
|
|
# Developed at the University of Groningen, the Netherlands, in #
|
|
|
|
# collaboration with non-profit organisations Certe Medical #
|
|
|
|
# Diagnostics & Advice, and University Medical Center Groningen. #
|
2019-01-02 23:24:07 +01:00
|
|
|
# #
|
|
|
|
# This R package is free software; you can freely use and distribute #
|
|
|
|
# it for both personal and commercial purposes under the terms of the #
|
|
|
|
# GNU General Public License version 2.0 (GNU GPL-2), as published by #
|
|
|
|
# the Free Software Foundation. #
|
2020-01-05 17:22:09 +01:00
|
|
|
# We created this package for both routine data analysis and academic #
|
|
|
|
# research and it was publicly released in the hope that it will be #
|
|
|
|
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
|
2020-10-08 11:16:03 +02:00
|
|
|
# #
|
|
|
|
# Visit our website for the full manual and a complete tutorial about #
|
2021-02-02 23:57:35 +01:00
|
|
|
# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
|
2019-01-02 23:24:07 +01:00
|
|
|
# ==================================================================== #
|
|
|
|
*/
|
|
|
|
|
2021-04-29 17:16:30 +02:00
|
|
|
/* R for Data Science (r4ds) on vignettes (articles) */
|
|
|
|
#r4ds {
|
|
|
|
display: flex;
|
|
|
|
border-bottom: 1px solid #ddd;
|
|
|
|
margin-bottom: 10px;
|
|
|
|
padding-bottom: 10px;
|
2019-02-09 22:16:24 +01:00
|
|
|
}
|
2021-04-29 17:16:30 +02:00
|
|
|
#r4ds .txt {
|
|
|
|
width: 67%;
|
|
|
|
}
|
|
|
|
#r4ds .img {
|
|
|
|
width: 33%;
|
2019-02-09 22:16:24 +01:00
|
|
|
}
|
|
|
|
|
2018-12-30 10:27:28 +01:00
|
|
|
/* class for footer */
|
2019-01-22 19:55:11 +01:00
|
|
|
.footer_logo {
|
2019-01-25 20:47:57 +01:00
|
|
|
float: right;
|
|
|
|
height: 43px;
|
|
|
|
margin-top: 2px;
|
2019-01-22 19:55:11 +01:00
|
|
|
}
|
2019-02-08 16:06:54 +01:00
|
|
|
.partner_logo {
|
|
|
|
width: 19%;
|
|
|
|
min-width: 125px;
|
|
|
|
}
|
2019-11-23 12:39:57 +01:00
|
|
|
.countries_map {
|
|
|
|
float: left;
|
|
|
|
padding: 0 10px 10px 0;
|
2019-11-30 12:01:50 +01:00
|
|
|
max-width: 35%;
|
2019-11-23 12:39:57 +01:00
|
|
|
}
|
2019-01-22 19:55:11 +01:00
|
|
|
@media only screen and (max-width: 992px) {
|
|
|
|
.footer_logo {
|
2019-01-25 20:47:57 +01:00
|
|
|
float: left;
|
|
|
|
margin-top: 15px;
|
2019-01-22 19:55:11 +01:00
|
|
|
}
|
2018-12-30 10:27:28 +01:00
|
|
|
}
|
2019-01-25 20:47:57 +01:00
|
|
|
footer p {
|
|
|
|
display: inline-block;
|
|
|
|
}
|
2018-12-30 10:27:28 +01:00
|
|
|
|
2018-12-29 22:24:19 +01:00
|
|
|
/* Supports icons for brand using font-awesome */
|
|
|
|
.fab {
|
2019-01-21 15:53:01 +01:00
|
|
|
font-family: "Font Awesome 5 Brands" !important;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
|
|
|
|
2019-01-02 23:24:07 +01:00
|
|
|
/* Remove the 'Read more on our website!' part from the manual pages */
|
|
|
|
#read-more-on-our-website-,
|
|
|
|
#read-more-on-our-website- + p,
|
|
|
|
li a[href="#read-more-on-our-website-"] {
|
2020-05-20 12:00:17 +02:00
|
|
|
display: none !important;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
2019-01-02 23:24:07 +01:00
|
|
|
|
2021-07-23 21:42:11 +02:00
|
|
|
code {
|
|
|
|
color: black;
|
|
|
|
background-color: #f4f4f4;
|
|
|
|
}
|
2019-01-02 23:24:07 +01:00
|
|
|
/* make colour darker and better readable for links */
|
|
|
|
code a, code a:hover, code a:focus,
|
|
|
|
pre a, pre a:hover, pre a:focus,
|
|
|
|
a, a:hover, a:focus {
|
|
|
|
/* do not set colour to element without href attribute, they aren't links! */
|
|
|
|
color: black;
|
|
|
|
}
|
|
|
|
a[href], a[href]:hover, a[href]:focus,
|
|
|
|
code a[href], code a[href]:hover, code a[href]:focus,
|
2019-01-11 20:37:23 +01:00
|
|
|
a[href] code, a[href] code:hover, a[href] code:focus,
|
2019-01-02 23:24:07 +01:00
|
|
|
pre a[href], pre a[href]:hover, pre a[href]:focus,
|
|
|
|
a code[href], a code[href]:hover, a code[href]:focus,
|
|
|
|
a pre[href], a pre[href]:hover, a pre[href]:focus {
|
|
|
|
/* adjusted colour for all real links; having href attribute */
|
2018-12-29 22:24:19 +01:00
|
|
|
color: #128f76;
|
|
|
|
}
|
2021-07-23 21:42:11 +02:00
|
|
|
|
2021-02-17 10:58:13 +01:00
|
|
|
.ot, .dv, .fl, .cn {
|
2019-02-14 15:18:17 +01:00
|
|
|
/* numbers and TRUE/FALSE */
|
|
|
|
color: slategray;
|
|
|
|
}
|
2018-12-29 22:24:19 +01:00
|
|
|
|
|
|
|
/* syntax font */
|
|
|
|
pre, code {
|
2019-01-21 15:53:01 +01:00
|
|
|
font-family: 'Courier New', monospace;
|
|
|
|
font-size: 100% !important;
|
|
|
|
font-weight: bold;
|
2020-12-21 22:46:29 +01:00
|
|
|
/*background-color: #f4f4f4*/;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
2021-08-16 21:54:34 +02:00
|
|
|
pre code {
|
|
|
|
word-wrap: normal !important;
|
|
|
|
white-space: pre !important;
|
|
|
|
}
|
2018-12-31 01:48:53 +01:00
|
|
|
pre {
|
|
|
|
font-size: 90% !important;
|
|
|
|
}
|
2019-01-21 15:53:01 +01:00
|
|
|
kbd {
|
|
|
|
display: inline-block;
|
|
|
|
padding: 0 4px;
|
|
|
|
box-shadow: 1px 1px 1px #2c3e50;
|
|
|
|
margin: 2px;
|
|
|
|
font-size: small;
|
|
|
|
vertical-align: text-bottom;
|
|
|
|
color: #2c3e50;
|
2019-01-26 23:22:56 +01:00
|
|
|
background: #eeeeee;
|
2019-01-21 15:53:01 +01:00
|
|
|
font-weight: bold;
|
|
|
|
}
|
|
|
|
|
2018-12-29 22:24:19 +01:00
|
|
|
li, p {
|
2019-01-21 15:53:01 +01:00
|
|
|
line-height: 1.5;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
2019-09-01 13:16:57 +02:00
|
|
|
li p {
|
|
|
|
margin-top: 10.5px;
|
|
|
|
}
|
2020-07-28 18:39:57 +02:00
|
|
|
.template-news li p {
|
|
|
|
margin: 0;
|
|
|
|
}
|
2018-12-29 22:24:19 +01:00
|
|
|
|
2018-12-31 01:48:53 +01:00
|
|
|
/* slightly smaller blockquote */
|
|
|
|
blockquote {
|
2019-01-21 15:53:01 +01:00
|
|
|
font-size: 98%;
|
2018-12-31 01:48:53 +01:00
|
|
|
}
|
2020-07-28 18:39:57 +02:00
|
|
|
.template-home blockquote {
|
|
|
|
border: 5px solid #128f7645 !important;
|
|
|
|
}
|
2018-12-31 01:48:53 +01:00
|
|
|
|
|
|
|
/* 2nd list in navigation should be smaller */
|
|
|
|
#tocnav li li {
|
|
|
|
font-size: 90%;
|
|
|
|
margin-left: 5px;
|
|
|
|
}
|
|
|
|
|
2018-12-29 22:24:19 +01:00
|
|
|
/* new <help> element with dotted underline */
|
|
|
|
help {
|
|
|
|
border-bottom: 1px dotted;
|
|
|
|
cursor: help;
|
|
|
|
}
|
|
|
|
|
|
|
|
/* replace 'Developers' with 'Authors' */
|
|
|
|
.developers h2 {
|
2019-01-21 15:53:01 +01:00
|
|
|
display: none;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
|
|
|
.developers:before {
|
2019-01-21 15:53:01 +01:00
|
|
|
content: 'Authors';
|
|
|
|
font-size: 1.5em;
|
2018-12-29 22:24:19 +01:00
|
|
|
}
|
|
|
|
|
2019-11-18 12:10:47 +01:00
|
|
|
/* Beautify manually added 'Last updated' text of NEWS */
|
|
|
|
div[id^=last-updated] h2 {
|
|
|
|
padding-top: 10px;
|
|
|
|
}
|
|
|
|
|
2018-12-29 22:24:19 +01:00
|
|
|
.version.label {
|
|
|
|
display: none;
|
|
|
|
}
|
|
|
|
|
2019-01-08 16:23:45 +01:00
|
|
|
/* Date of vignettes */
|
|
|
|
.template-article .date:before {
|
2019-01-21 15:53:01 +01:00
|
|
|
content: 'Last updated: ';
|
2019-01-08 16:23:45 +01:00
|
|
|
}
|
|
|
|
.template-article .date {
|
2019-01-21 15:53:01 +01:00
|
|
|
font-size: 14px;
|
|
|
|
padding-top: 40px;
|
2019-01-08 16:23:45 +01:00
|
|
|
}
|
|
|
|
|
2018-12-29 22:24:19 +01:00
|
|
|
/* more space between icon and text in top menu */
|
|
|
|
#navbar .fa,
|
|
|
|
#navbar .fab,
|
|
|
|
#navbar .fal,
|
|
|
|
#navbar .far,
|
|
|
|
#navbar .fas {
|
|
|
|
margin-right: 5px;
|
|
|
|
}
|
2019-01-02 23:24:07 +01:00
|
|
|
#navbar li.dropdown li .fa {
|
|
|
|
font-size: 120%;
|
|
|
|
width: 24px;
|
|
|
|
text-align: center;
|
|
|
|
}
|
2018-12-31 01:48:53 +01:00
|
|
|
|
2019-05-28 16:50:40 +02:00
|
|
|
/* tables, make them look like scientific ones */
|
2021-02-25 12:31:12 +01:00
|
|
|
.table {
|
2018-12-31 01:48:53 +01:00
|
|
|
font-size: 90%;
|
|
|
|
}
|
2021-02-25 12:31:12 +01:00
|
|
|
.table * {
|
2021-02-17 10:58:13 +01:00
|
|
|
vertical-align: middle !important;
|
|
|
|
}
|
2021-02-25 12:31:12 +01:00
|
|
|
.table td {
|
2018-12-31 01:48:53 +01:00
|
|
|
padding: 4px !important;
|
|
|
|
}
|
2021-04-29 17:16:30 +02:00
|
|
|
.table thead,
|
|
|
|
.template-reference-topic .table tr:first-child {
|
|
|
|
/* tables in manual are in LaTeX and thus have no thead */
|
2019-01-21 15:53:01 +01:00
|
|
|
border-top: 2px solid black;
|
|
|
|
border-bottom: 2px solid black;
|
2018-12-31 01:48:53 +01:00
|
|
|
}
|
2021-04-29 17:16:30 +02:00
|
|
|
.table thead ~ tbody,
|
|
|
|
.template-reference-topic .table tr:last-child {
|
2019-01-21 15:53:01 +01:00
|
|
|
/* only when it has a header */
|
2021-04-29 17:16:30 +02:00
|
|
|
/* tables in manual are in LaTeX and thus have no thead */
|
2019-01-21 15:53:01 +01:00
|
|
|
border-bottom: 2px solid black;
|
2018-12-31 01:48:53 +01:00
|
|
|
}
|
2021-02-25 12:31:12 +01:00
|
|
|
.table thead th {
|
2021-04-29 17:16:30 +02:00
|
|
|
/* text-align: inherit; */
|
2020-02-17 14:38:01 +01:00
|
|
|
}
|
2021-02-26 12:11:29 +01:00
|
|
|
/* all tables, including argument lists */
|
|
|
|
table a:not(.btn) {
|
2019-01-21 15:53:01 +01:00
|
|
|
text-decoration: inherit;
|
2019-01-11 20:37:23 +01:00
|
|
|
}
|
2021-02-26 12:11:29 +01:00
|
|
|
table a:not(.btn):hover {
|
2019-01-21 15:53:01 +01:00
|
|
|
text-decoration: underline;
|
|
|
|
}
|
2021-05-23 23:11:16 +02:00
|
|
|
.template-article thead th {
|
|
|
|
text-align: inherit;
|
|
|
|
}
|
2019-01-21 15:53:01 +01:00
|
|
|
|
2019-01-25 13:18:41 +01:00
|
|
|
/* text below header in manual overview */
|
2019-01-21 15:53:01 +01:00
|
|
|
.template-reference-index h2 ~ p {
|
2019-11-29 19:43:23 +01:00
|
|
|
font-size: 15px;
|
2019-07-09 11:22:46 +02:00
|
|
|
}
|
|
|
|
.template-reference-topic h2 {
|
|
|
|
font-size: 24px;
|
2019-01-11 20:37:23 +01:00
|
|
|
}
|
2019-11-29 19:43:23 +01:00
|
|
|
.template-reference-topic h3 {
|
|
|
|
font-size: 18px;
|
|
|
|
}
|
|
|
|
.template-reference-topic h4 {
|
|
|
|
font-size: 15px;
|
2021-04-29 17:16:30 +02:00
|
|
|
font-weight: bold;
|
|
|
|
padding-top: 35px;
|
2019-11-29 19:43:23 +01:00
|
|
|
}
|
2019-01-25 13:18:41 +01:00
|
|
|
|
2020-05-25 01:01:14 +02:00
|
|
|
.template-home h4 {
|
|
|
|
padding-top: 40px !important;
|
|
|
|
font-weight: bold !important;
|
|
|
|
}
|
2020-12-08 12:37:25 +01:00
|
|
|
.template-home h5 {
|
|
|
|
font-weight: normal;
|
|
|
|
font-style: italic;
|
|
|
|
font-size: 16px;
|
|
|
|
}
|
2020-05-25 01:01:14 +02:00
|
|
|
|
2019-01-25 13:18:41 +01:00
|
|
|
/* logos on index page */
|
|
|
|
.logo_img {
|
|
|
|
display: inline-block;
|
|
|
|
}
|
|
|
|
.logo_txt {
|
|
|
|
display: inline;
|
|
|
|
font-size: 125%;
|
|
|
|
vertical-align: middle;
|
|
|
|
color: black;
|
|
|
|
font-weight: bold;
|
|
|
|
}
|
2020-08-10 11:44:58 +02:00
|
|
|
|
|
|
|
.btn.btn-info.btn-amr {
|
|
|
|
background: #128f76;
|
|
|
|
color: #ffffff;
|
|
|
|
border-color: #128f76;
|
|
|
|
line-height: 1;
|
|
|
|
width: 100%;
|
|
|
|
font-weight: bold;
|
|
|
|
}
|
|
|
|
.btn.btn-info.btn-amr:hover {
|
|
|
|
background: #128f7645;
|
|
|
|
color: #2c3e50;
|
|
|
|
}
|
2020-08-16 21:38:42 +02:00
|
|
|
.home-buttons {
|
|
|
|
display: flex;
|
|
|
|
margin-bottom: 5px;
|
|
|
|
}
|
|
|
|
.home-buttons a {
|
|
|
|
display: grid;
|
|
|
|
text-align: center;
|
2020-08-17 21:49:58 +02:00
|
|
|
font-size: 14px;
|
2020-08-16 21:38:42 +02:00
|
|
|
text-transform: uppercase;
|
2020-08-17 21:49:58 +02:00
|
|
|
max-width: 25%;
|
2020-08-16 21:38:42 +02:00
|
|
|
}
|
|
|
|
.home-buttons a:hover {
|
|
|
|
text-decoration: none;
|
2020-08-17 21:49:58 +02:00
|
|
|
opacity: 0.75;
|
2020-08-16 21:38:42 +02:00
|
|
|
}
|
|
|
|
.home-buttons div {
|
|
|
|
display: grid;
|
|
|
|
padding: 10px;
|
|
|
|
}
|
|
|
|
.home-buttons .fa {
|
|
|
|
font-size: 3.5em;
|
|
|
|
}
|
2020-08-29 21:41:46 +02:00
|
|
|
.dataset-within-r {
|
|
|
|
display: none;
|
|
|
|
}
|
2020-08-29 21:52:51 +02:00
|
|
|
.dataset-download-button {
|
2020-09-03 12:31:48 +02:00
|
|
|
margin-right: 2%;
|
2020-08-29 21:52:51 +02:00
|
|
|
}
|
|
|
|
.dataset-download-button img {
|
2020-09-03 12:31:48 +02:00
|
|
|
width: 80px !important;
|
|
|
|
max-width: 14% !important;
|
2020-08-29 21:52:51 +02:00
|
|
|
}
|