AMR/NAMESPACE

# Generated by roxygen2: do not edit by hand

importFrom(crayon,bgGreen)
importFrom(crayon,bgRed)
importFrom(crayon,bgYellow)
importFrom(crayon,black)
importFrom(crayon,blue)
importFrom(crayon,bold)
importFrom(crayon,green)
importFrom(crayon,italic)
importFrom(crayon,magenta)
importFrom(crayon,red)
importFrom(crayon,silver)
importFrom(crayon,strip_style)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,setkey)
importFrom(dplyr,"%>%")
importFrom(dplyr,all_vars)
importFrom(dplyr,any_vars)
importFrom(dplyr,arrange)
importFrom(dplyr,arrange_at)
importFrom(dplyr,as_tibble)
importFrom(dplyr,between)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,desc)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,filter_all)
importFrom(dplyr,filter_at)
importFrom(dplyr,full_join)
importFrom(dplyr,funs)
importFrom(dplyr,group_by)
importFrom(dplyr,group_by_at)
importFrom(dplyr,group_vars)
importFrom(dplyr,if_else)
importFrom(dplyr,lag)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_all)
importFrom(dplyr,mutate_at)
importFrom(dplyr,n)
importFrom(dplyr,n_distinct)
importFrom(dplyr,n_groups)
importFrom(dplyr,progress_estimated)
importFrom(dplyr,pull)
importFrom(dplyr,row_number)
importFrom(dplyr,select)
importFrom(dplyr,select_if)
importFrom(dplyr,slice)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_if)
importFrom(dplyr,tibble)
importFrom(dplyr,top_n)
importFrom(dplyr,transmute)
importFrom(dplyr,ungroup)
importFrom(dplyr,vars)
importFrom(grDevices,boxplot.stats)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,hist)
importFrom(graphics,plot)
importFrom(graphics,text)
importFrom(hms,is.hms)
importFrom(knitr,kable)
importFrom(stats,complete.cases)
importFrom(stats,fivenum)
importFrom(stats,glm)
importFrom(stats,lm)
importFrom(stats,mad)
importFrom(stats,pchisq)
importFrom(stats,predict)
importFrom(stats,sd)
importFrom(utils,browseVignettes)
importFrom(utils,installed.packages)
first commit 2018-02-21 11:52:31 +01:00			`# Generated by roxygen2: do not edit by hand`

new EUCAST rules: clinical breakpoints 2018-10-17 17:32:34 +02:00			`importFrom(crayon,bgGreen)`
			`importFrom(crayon,bgRed)`
			`importFrom(crayon,bgYellow)`
			`importFrom(crayon,black)`
			`importFrom(crayon,blue)`
			`importFrom(crayon,bold)`
			`importFrom(crayon,green)`
eucast update 2018-11-01 20:23:33 +01:00			`importFrom(crayon,italic)`
better as.mo handling 2018-12-06 14:36:39 +01:00			`importFrom(crayon,magenta)`
param rules for EUCAST 2018-10-18 12:10:10 +02:00			`importFrom(crayon,red)`
			`importFrom(crayon,silver)`
freq: fix na.rm in groups 2018-11-08 16:10:03 +01:00			`importFrom(crayon,strip_style)`
first inclusion of ITIS data 2018-09-24 23:33:29 +02:00			`importFrom(data.table,as.data.table)`
			`importFrom(data.table,data.table)`
			`importFrom(data.table,setkey)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,"%>%")`
fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00			`importFrom(dplyr,all_vars)`
			`importFrom(dplyr,any_vars)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,arrange)`
			`importFrom(dplyr,arrange_at)`
add clipboard functions again 2018-06-27 15:54:56 +02:00			`importFrom(dplyr,as_tibble)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,between)`
support groups for portion_df, update README 2018-08-12 22:34:03 +02:00			`importFrom(dplyr,bind_rows)`
small fixes 2018-07-28 09:34:03 +02:00			`importFrom(dplyr,case_when)`
MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00			`importFrom(dplyr,desc)`
support groups for portion_df, update README 2018-08-12 22:34:03 +02:00			`importFrom(dplyr,everything)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,filter)`
fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00			`importFrom(dplyr,filter_all)`
freq: fix na.rm in groups 2018-11-08 16:10:03 +01:00			`importFrom(dplyr,filter_at)`
diff for freq, fix for mo_shortname 2018-09-29 21:54:32 +02:00			`importFrom(dplyr,full_join)`
fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00			`importFrom(dplyr,funs)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,group_by)`
			`importFrom(dplyr,group_by_at)`
support groups for portion_df, update README 2018-08-12 22:34:03 +02:00			`importFrom(dplyr,group_vars)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,if_else)`
			`importFrom(dplyr,lag)`
			`importFrom(dplyr,left_join)`
			`importFrom(dplyr,mutate)`
fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00			`importFrom(dplyr,mutate_all)`
param rules for EUCAST 2018-10-18 12:10:10 +02:00			`importFrom(dplyr,mutate_at)`
dplyr 0.8.0 support, fixes #7 2018-12-22 22:39:34 +01:00			`importFrom(dplyr,n)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,n_distinct)`
resistance predict 2019-01-15 12:45:24 +01:00			`importFrom(dplyr,n_groups)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,progress_estimated)`
			`importFrom(dplyr,pull)`
			`importFrom(dplyr,row_number)`
			`importFrom(dplyr,select)`
count_* functions 2018-08-22 00:02:26 +02:00			`importFrom(dplyr,select_if)`
abname, logo 2018-02-21 12:10:00 +01:00			`importFrom(dplyr,slice)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,summarise)`
new ggplot enhancement 2018-08-11 21:30:00 +02:00			`importFrom(dplyr,summarise_if)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(dplyr,tibble)`
top_freq 2018-06-20 14:47:37 +02:00			`importFrom(dplyr,top_n)`
fixes 2019-01-15 16:38:54 +01:00			`importFrom(dplyr,transmute)`
grouping var for freq 2018-11-06 16:41:59 +01:00			`importFrom(dplyr,ungroup)`
param rules for EUCAST 2018-10-18 12:10:10 +02:00			`importFrom(dplyr,vars)`
MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00			`importFrom(grDevices,boxplot.stats)`
resistance predict 2019-01-15 12:45:24 +01:00			`importFrom(graphics,arrows)`
import from graphics 2018-03-13 15:40:10 +01:00			`importFrom(graphics,axis)`
			`importFrom(graphics,barplot)`
kurtosis, skewness, start with ML 2018-07-08 22:14:55 +02:00			`importFrom(graphics,hist)`
first commit 2018-02-21 11:52:31 +01:00			`importFrom(graphics,plot)`
			`importFrom(graphics,text)`
CRAN fixes for release 0.4.0 https://cran.r-project.org/web/checks/check_results_AMR.html 2018-10-09 13:53:33 +02:00			`importFrom(hms,is.hms)`
new g.test() and edited freq() 2018-07-01 21:40:37 +02:00			`importFrom(knitr,kable)`
new g.test, extra unit tests 2018-07-10 12:27:07 +02:00			`importFrom(stats,complete.cases)`
MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00			`importFrom(stats,fivenum)`
improvement for forecasting resistance 2018-07-26 16:30:42 +02:00			`importFrom(stats,glm)`
			`importFrom(stats,lm)`
include IQR and MAD in freq 2018-07-03 11:30:40 +02:00			`importFrom(stats,mad)`
new g.test() and edited freq() 2018-07-01 21:40:37 +02:00			`importFrom(stats,pchisq)`
improvement for forecasting resistance 2018-07-26 16:30:42 +02:00			`importFrom(stats,predict)`
MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00			`importFrom(stats,sd)`
top_freq 2018-06-20 14:47:37 +02:00			`importFrom(utils,browseVignettes)`
read.4D improvements 2018-11-15 12:42:35 +01:00			`importFrom(utils,installed.packages)`