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anaerobic codes

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dr. M.S. (Matthijs) Berends
2023-04-17 11:26:19 +02:00
parent ad3061c754
commit cabffb22fd
6 changed files with 19 additions and 9 deletions
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R/mo_property.R
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@ -480,7 +480,7 @@ mo_gramstain <- function(x, language = get_AMR_locale(), keep_synonyms = getOpti
# but class Negativicutes (of phylum Bacillota) are Gram-negative!
mo_class(x.mo, language = NULL, keep_synonyms = keep_synonyms) != "Negativicutes")
# and of course our own ID for Gram-positives
| x.mo == "B_GRAMP"] <- "Gram-positive"
| x.mo %in% c("B_GRAMP", "B_ANAER-POS")] <- "Gram-positive"
load_mo_uncertainties(metadata)
translate_into_language(x, language = language, only_unknown = FALSE)