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Commit Graph

14 Commits

Author SHA1 Message Date
640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
7cda9e575b prepare for CRAN 2023-10-20 14:51:48 +02:00
acb534102b new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
9591688811 documentation update 2023-05-27 10:39:22 +02:00
7ad8635994 documentation for 'data.table' AB selectors 2023-03-11 16:54:02 +01:00
45e840c02f update NEWS 2023-03-11 14:43:31 +01:00
1d3d7d40bc get episode unit tests 2023-02-24 19:54:56 +01:00
2c5a9bb622 new relative episode determination in get_episode(), fix for plotting disk/MIC values 2023-02-24 17:06:30 +01:00
45a9697c84 unit tests 2023-02-12 17:10:48 +01:00
68abb00c59 add include_screening to as.sir() 2023-02-12 15:09:54 +01:00
bc434db835 bring back antibiogram(), without deps 2023-02-10 16:18:00 +01:00
70a7ba0206 fix first isolate 2023-02-10 13:13:17 +01:00
1a0dc4bf46 revert back to pre-antibiogram 2023-02-09 13:07:39 +01:00
9e99e66f01 use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00