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7cd9ca274c
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add strep groups to ABCG
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2023-07-12 11:41:25 +01:00 |
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66eeeb4b88
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cleanup
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2023-07-11 14:29:40 +02:00 |
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8df1cd8d97
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interpretation fixes
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2023-07-11 09:50:45 +02:00 |
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1b499bf012
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fixes
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2023-07-10 17:02:28 +02:00 |
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a4e2e25e3f
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reftbl in plots, speedup for as.sir() and mo_validate
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2023-07-10 16:43:46 +02:00 |
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70c601ca11
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breakpoints UTI interpretation fix
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2023-07-10 13:41:52 +02:00 |
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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Dr. Matthijs Berends
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f065945d7b
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Update clinical breakpoints and fix some as.mo() bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
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2023-06-22 15:10:59 +02:00 |
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9591688811
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documentation update
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2023-05-27 10:39:22 +02:00 |
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0bcf55d3b6
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improve as.mo()
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2023-05-24 15:55:53 +02:00 |
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80cfc503c2
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check for 2.0
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2023-03-12 13:02:37 +01:00 |
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262598b8d7
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support for old rsi arguments
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2023-03-11 14:24:34 +01:00 |
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c2cfc5ef84
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fix for antibiogram(), transform WHONET data set to sir
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2023-02-22 15:40:05 +01:00 |
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dad25302f2
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make rsi work in more cases, documentation update
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2023-02-22 14:38:57 +01:00 |
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8d902410f9
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unit tests
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2023-02-18 14:56:06 +01:00 |
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45a9697c84
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unit tests
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2023-02-12 17:10:48 +01:00 |
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68abb00c59
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add include_screening to as.sir()
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2023-02-12 15:09:54 +01:00 |
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c740967cf2
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fix for binding rows
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2023-02-12 11:20:14 +01:00 |
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c51fb24363
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pm_bind_rows
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2023-02-11 22:28:48 +01:00 |
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2007c3eef3
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bind_rows
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2023-02-10 17:09:48 +01:00 |
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bc434db835
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bring back antibiogram(), without deps
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2023-02-10 16:18:00 +01:00 |
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1a0dc4bf46
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revert back to pre-antibiogram
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2023-02-09 13:07:39 +01:00 |
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9e99e66f01
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use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
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2023-02-06 11:57:22 +01:00 |
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830c67f1bf
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documentation, unit tests
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2023-01-24 10:20:27 +01:00 |
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eef00069fd
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add all options to documentation
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2023-01-23 20:07:57 +01:00 |
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19fd0ef121
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sort sir history
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2023-01-23 15:01:21 +01:00 |
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Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |
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