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mirror of https://github.com/msberends/AMR.git synced 2025-07-17 21:13:17 +02:00
Commit Graph

784 Commits

Author SHA1 Message Date
6819473457 (v2.1.1.9259) Parallel computing for R < 4 2025-04-27 20:25:39 +02:00
52cd3e88cd (v2.1.1.9258) fix for R <= 3.6 2025-04-27 17:53:13 +02:00
f340e257fa (v2.1.1.9256) unit tests 2025-04-26 21:29:50 +02:00
d166aa2c1d (v2.1.1.9255) fix examples 2025-04-26 16:35:14 +02:00
92316d5ddc (v2.1.1.9254) fix antimicrobial synonyms 2025-04-26 16:23:14 +02:00
4e7fca3b38 (v2.1.1.9253) parallel computing 2025-04-26 15:47:00 +02:00
abee2a954e (v2.1.1.9252) fix MIC for >= and <= 2025-04-25 10:19:40 +02:00
4a336d040c (v2.1.1.9250) Automated README and index.md 2025-04-21 15:37:26 +02:00
be13934fe7 (v2.1.1.9249) unit test 2025-04-20 17:49:47 +02:00
9e64d7708e (v2.1.1.9248) unit test fix 2025-04-20 15:27:36 +02:00
ea443f7483 (v2.1.1.9247) CLSI/EUCAST 2025! 2025-04-20 12:55:31 +02:00
ca00ed468e (v2.1.1.9243) fix sir documentation 2025-04-18 16:32:45 +02:00
29b0ef1089 (v2.1.1.9242) sir log 2025-04-18 16:03:50 +02:00
579025f678 (v2.1.1.9241) fix sir 2025-04-18 13:25:59 +02:00
cf91e677c6 (v2.1.1.9240) fix sir interpretation 2025-04-16 15:22:12 +02:00
d31371613e (v2.1.1.9237) clean-up 2025-04-13 09:59:40 +02:00
40d7a971c3 (v2.1.1.9236) documentation 2025-04-12 11:46:42 +02:00
36fd99e1f4 (v2.1.1.9235) New website! 2025-04-08 15:54:30 +01:00
a905303296 (v2.1.1.9234) fix CLSI 2025-04-07 17:36:01 +01:00
1fdab84103 (v2.1.1.9233) chore: make all argument texts full sentences 2025-03-31 14:53:24 +02:00
63099cd81e (v2.1.1.9232) is.mic() iteration, documentation cleanup 2025-03-31 10:51:31 +02:00
b972bbb96f (v2.1.1.9230) deprecated resistance_predict(), data set folder name without space 2025-03-28 16:48:56 +01:00
49da312506 (v2.1.1.9228) repo cleaning 2025-03-28 11:17:49 +01:00
d77ad6bd6e (v2.1.1.9227) unit test fixes 2025-03-27 15:36:27 +01:00
969a42cc8c (v2.1.1.9226) update intrinsic_resistant, unit test fixes 2025-03-27 15:20:22 +01:00
e6f88241b2 (v2.1.1.9225) fix geom_hline()/_vline() in MIC plotting, add EUCAT 1.2 in full, add London contribs, fix mo codes, add Kleb pneu complex 2025-03-26 17:19:17 +01:00
8deaf2c8eb (v2.1.1.9224) skip tests on cran 2025-03-20 23:29:21 +01:00
bb110646db (v2.1.1.9223) allow + ab 2025-03-20 22:56:32 +01:00
287e361a54 (v2.1.1.9218) Fix unit tests 2025-03-19 16:05:24 +01:00
4dc4398ad1 (v2.1.1.9217) allow + in amr selectors 2025-03-18 16:35:22 +01:00
7f1ae1f474 (v2.1.1.9203) unit tests 2025-03-15 13:25:23 +01:00
72f2e723fb (v2.1.1.9200) new argument capped_mic_handling, add Search to website 2025-03-14 17:01:50 +01:00
e134e01418 (v2.1.1.9198) support eucast expert rules 14 and 13.1 2025-03-14 10:10:35 +01:00
861331b1df (v2.1.1.9196) fix eucast, unit tests 2025-03-13 15:38:39 +01:00
9aab129ea6 (v2.1.1.9195) add BTL-S, fix ranks in unknown microorganisms 2025-03-13 14:30:14 +01:00
a7ef22a21e (v2.1.1.9194) new argument for missing R breakpoints - updated from WHONET 2025-03-12 16:24:38 +01:00
e1b7252ff6 (v2.1.1.9193) new antimicrobials for screening 2025-03-12 15:09:28 +01:00
067a8aca66 (v2.1.1.9192) fix fluoroquinolones and add bleomycin 2025-03-10 17:04:35 +01:00
a2c2be23c1 (v2.1.1.9190) antibiotics deprecation in antibiogram() 2025-03-09 10:41:11 +01:00
c7af397edf (v2.1.1.9189) Add the awesome Aislinn Cook 2025-03-07 23:25:50 +01:00
b67613ce08 (v2.1.1.9187) WISCA fix 2025-03-07 22:27:21 +01:00
f7938289eb (v2.1.1.9186) replace antibiotics with antimicrobials! 2025-03-07 20:43:26 +01:00
07efc292bc (v2.1.1.9163) cleanup 2025-02-27 14:04:29 +01:00
22e66741cc (v2.1.1.9160) cleanup 2025-02-26 20:28:33 +01:00
0c3ea4b538 (v2.1.1.9159) new approach as.ab() 2025-02-26 19:23:54 +01:00
195dfb4b91 (v2.1.1.9157) improved as.ab(), fixed knit_print of antibiogram 2025-02-26 13:27:20 +01:00
aa8f6af185 (v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro 2025-02-23 11:18:08 +01:00
226d10f546 (v2.1.1.9154) documentation fix 2025-02-22 22:07:56 +01:00
abb5602532 (v2.1.1.9153) mic plot fix 2025-02-22 21:26:38 +01:00
ef02f4a7f2 (v2.1.1.9151) update readme 2025-02-15 20:53:12 +01:00